Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34500 | Soybean | extracellular | 66.44 | 63.06 |
| KRG92302 | Soybean | extracellular | 65.1 | 61.78 |
| KRG90387 | Soybean | extracellular | 52.35 | 49.68 |
| KRH31721 | Soybean | endoplasmic reticulum | 50.34 | 47.77 |
| VIT_05s0049g00200.t01 | Wine grape | extracellular | 48.99 | 46.5 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 29.53 | 40.74 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 41.61 | 39.49 |
| AT5G43460.1 | Thale cress | extracellular | 40.27 | 38.96 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 40.94 | 38.85 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 40.27 | 38.22 |
| Os03t0149200-01 | Rice | extracellular | 40.27 | 38.22 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 40.27 | 38.22 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 31.54 | 37.9 |
| EER92848 | Sorghum | extracellular | 39.6 | 37.58 |
| KRG95647 | Soybean | plasma membrane | 39.6 | 37.58 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 40.94 | 37.2 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 38.93 | 37.18 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 38.93 | 37.18 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 38.93 | 36.94 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 38.93 | 36.94 |
| KRH67349 | Soybean | plasma membrane | 38.93 | 36.94 |
| CDY60669 | Canola | extracellular, plasma membrane, vacuole | 39.6 | 36.42 |
| Bra015305.1-P | Field mustard | extracellular, plasma membrane, vacuole | 39.6 | 36.42 |
| CDY18220 | Canola | extracellular, plasma membrane, vacuole | 39.6 | 36.42 |
| Bra030565.1-P | Field mustard | plasma membrane | 40.27 | 36.36 |
| CDY15499 | Canola | plasma membrane | 40.27 | 36.36 |
| CDY59304 | Canola | plasma membrane | 38.26 | 36.31 |
| Solyc06g053660.2.1 | Tomato | plasma membrane | 38.26 | 36.31 |
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 38.26 | 36.08 |
| KRH32166 | Soybean | endoplasmic reticulum | 37.58 | 35.9 |
| Os04t0181100-01 | Rice | plasma membrane | 37.58 | 35.67 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 37.58 | 35.44 |
| CDX86640 | Canola | extracellular, plasma membrane, vacuole | 38.93 | 35.37 |
| AT1G04340.1 | Thale cress | plasma membrane | 37.58 | 35.22 |
| CDY32939 | Canola | plasma membrane | 36.91 | 35.03 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 36.91 | 35.03 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 36.91 | 35.03 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 36.91 | 35.03 |
| Bra027498.1-P | Field mustard | plasma membrane | 36.91 | 35.03 |
| Os10t0445500-01 | Rice | plasma membrane | 36.24 | 34.18 |
| KRH19536 | Soybean | endoplasmic reticulum | 35.57 | 33.97 |
| OQU81217 | Sorghum | extracellular | 35.57 | 33.76 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 34.9 | 32.5 |
| CDY10063 | Canola | plasma membrane | 34.9 | 28.73 |
| PGSC0003DMT400042097 | Potato | cytosol | 35.57 | 27.18 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 34.9 | 21.49 |
Protein Annotations
| EMBL:ACUP02001288 | EnsemblPlants:KRH73866 | EnsemblPlantsGene:GLYMA_02G297500 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:HR_lesion | PANTHER:PTHR31474 | PANTHER:PTHR31474:SF4 | PFAM:PF05514 | ProteinID:KRH73866 | ProteinID:KRH73866.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0006ED6BD9 | UniProt:A0A0R0L3V4 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr2:-:47514258..47515110
Molecular Weight (calculated)
17105.3 Da
IEP (calculated)
10.171
GRAVY (calculated)
0.297
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRGIQCRSA NVRHVFSPFH SDGPIAKELI PKLTIVRRNL SSKLGVAILD IDVQPVIAST ILLKRVGGIL FVLGSTFGSY LLFLYLGLST PILYDFYNYR
101: SNIPEYYLFL NDFIQLCANY FLFPMFLSDD FTCITRRQIR KKIPKAKTI
101: SNIPEYYLFL NDFIQLCANY FLFPMFLSDD FTCITRRQIR KKIPKAKTI
001: MGFFSFLGRV LFASLFILSA WQMFNDGGPA AKELAPKLDL VKAHLSSRLG VTLPKIEVRQ VVATIIALKG VGGLLFVIGN TFGAYLLASY LVVFGPILYD
101: FYNYGPQERH FSLLLTEFLQ SVALFGALLF FIGMKNSTPA KKNLKKRTPK PKAA
101: FYNYGPQERH FSLLLTEFLQ SVALFGALLF FIGMKNSTPA KKNLKKRTPK PKAA
Arabidopsis Description
At5g43460/MWF20_18 [Source:UniProtKB/TrEMBL;Acc:Q9LSW5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.