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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60669 Canola extracellular, plasma membrane, vacuole 99.38 99.38
CDY18220 Canola extracellular, plasma membrane, vacuole 98.15 98.15
Bra030565.1-P Field mustard plasma membrane 91.36 89.7
Bra027498.1-P Field mustard plasma membrane 85.19 87.9
CDY10063 Canola plasma membrane 71.6 64.09
VIT_05s0049g00200.t01 Wine grape extracellular 59.88 61.78
KRH31721 Soybean endoplasmic reticulum 59.26 61.15
KRG92302 Soybean extracellular 59.26 61.15
KRG90387 Soybean extracellular 59.26 61.15
KRH34500 Soybean extracellular 58.64 60.51
Solyc06g053660.2.1 Tomato plasma membrane 56.17 57.96
Bra041032.1-P Field mustard extracellular 54.94 57.05
TraesCS4A01G415500.1 Wheat extracellular 54.32 56.05
Os03t0149200-01 Rice extracellular 53.7 55.41
Bra039861.1-P Field mustard plasma membrane 53.09 54.43
Os04t0181100-01 Rice plasma membrane 52.47 54.14
TraesCS4B01G316300.1 Wheat extracellular 52.47 54.14
TraesCS4D01G312900.1 Wheat extracellular 52.47 54.14
Zm00001d048402_P001 Maize extracellular, golgi, plasma membrane 52.47 54.14
EER92848 Sorghum extracellular 52.47 54.14
HORVU4Hr1G080140.1 Barley extracellular 52.47 54.14
Zm00001d032568_P001 Maize endoplasmic reticulum, extracellular, vacuole 35.8 53.7
OQU81217 Sorghum extracellular 51.85 53.5
GSMUA_Achr4P26720_001 Banana extracellular 51.23 53.21
GSMUA_Achr1P01370_001 Banana extracellular 51.23 53.21
GSMUA_Achr2P04100_001 Banana extracellular 51.85 53.16
TraesCS2D01G029000.1 Wheat extracellular 50.62 52.23
GSMUA_Achr11P... Banana endoplasmic reticulum, extracellular, plasma membrane 50.62 52.23
Os10t0445500-01 Rice plasma membrane 50.62 51.9
Zm00001d027680_P003 Maize endoplasmic reticulum, extracellular, plasma membrane 52.47 51.83
TraesCS2A01G026900.1 Wheat extracellular 50.0 51.59
TraesCS2B01G040200.1 Wheat extracellular 50.0 51.59
GSMUA_Achr8P14320_001 Banana plasma membrane 48.77 50.0
Zm00001d032483_P001 Maize endoplasmic reticulum, extracellular, vacuole 37.04 48.39
Zm00001d018662_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 47.53 48.12
KRH73866 Soybean plastid 36.42 39.6
PGSC0003DMT400042097 Potato cytosol 45.68 37.95
Zm00001d025020_P001 Maize extracellular, golgi, plasma membrane 51.23 34.3
Protein Annotations
EnsemblPlants:Bra015305.1EnsemblPlants:Bra015305.1-PEnsemblPlantsGene:Bra015305GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0016020GO:GO:0016021InterPro:HR_lesionPANTHER:PTHR31474
PANTHER:PTHR31474:SF4PFAM:PF05514SEG:segSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002544097
UniProt:M4DFN2MapMan:35.2::::
Description
AT1G04340 (E=3e-058) | lesion inducing protein-related
Coordinates
chrA10:+:2567294..2568444
Molecular Weight (calculated)
17519.7 Da
IEP (calculated)
10.337
GRAVY (calculated)
0.523
Length
162 amino acids
Sequence
(BLAST)
001: MGFFSFLGRV LFASLFILSA WQMFNDFGAD GGPAAKELAP KLGLAKSHLS SRLGVALPDI EVKQVVSAIV ALKGLGGLLF VVGNIFGAYL LAFYLVVVSP
101: ILYDFYNYGP EDRQFSLLLT EFLQSVALLG ALLFFIGMKN SRTTSSSKSS NLKKRTPKPK AA
Best Arabidopsis Sequence Match ( AT1G04340.1 )
(BLAST)
001: MGFFSFLGRV LFASLFILSA WQMFNDFGTD GGPAAKELAP KLDLTKAHLS SILGVSLPNL EVKQVVWAIV ALKGLGGLLF VIGNIFGAYL LAVYLVVVSP
101: ILYDFYNYGP EDRQFSLLLT EFLQSVALLG ALLFFIGMKN STTSSKRILK KRTPKPKAA
Arabidopsis Description
At1g04340/F19P19_23 [Source:UniProtKB/TrEMBL;Acc:O22690]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.