Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92302 | Soybean | extracellular | 89.81 | 89.81 |
| KRG90387 | Soybean | extracellular | 77.07 | 77.07 |
| KRH31721 | Soybean | endoplasmic reticulum | 75.8 | 75.8 |
| KRH73866 | Soybean | plastid | 63.06 | 66.44 |
| VIT_05s0049g00200.t01 | Wine grape | extracellular | 65.61 | 65.61 |
| AT5G43460.1 | Thale cress | extracellular | 60.51 | 61.69 |
| CDY18220 | Canola | extracellular, plasma membrane, vacuole | 60.51 | 58.64 |
| Bra015305.1-P | Field mustard | extracellular, plasma membrane, vacuole | 60.51 | 58.64 |
| CDY59304 | Canola | plasma membrane | 58.6 | 58.6 |
| CDY60669 | Canola | extracellular, plasma membrane, vacuole | 59.87 | 58.02 |
| CDY32939 | Canola | plasma membrane | 57.96 | 57.96 |
| Bra027498.1-P | Field mustard | plasma membrane | 57.96 | 57.96 |
| AT1G04340.1 | Thale cress | plasma membrane | 58.6 | 57.86 |
| CDY15499 | Canola | plasma membrane | 60.51 | 57.58 |
| Bra030565.1-P | Field mustard | plasma membrane | 60.51 | 57.58 |
| CDX86640 | Canola | extracellular, plasma membrane, vacuole | 59.87 | 57.32 |
| Solyc06g053660.2.1 | Tomato | plasma membrane | 55.41 | 55.41 |
| KRG95647 | Soybean | plasma membrane | 55.41 | 55.41 |
| KRH32166 | Soybean | endoplasmic reticulum | 54.78 | 55.13 |
| KRH67349 | Soybean | plasma membrane | 54.78 | 54.78 |
| KRH19536 | Soybean | endoplasmic reticulum | 54.14 | 54.49 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 54.14 | 54.14 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 53.5 | 53.85 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 53.5 | 53.85 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 53.5 | 53.5 |
| Os03t0149200-01 | Rice | extracellular | 53.5 | 53.5 |
| EER92848 | Sorghum | extracellular | 53.5 | 53.5 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 54.78 | 52.44 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 52.23 | 52.23 |
| Os04t0181100-01 | Rice | plasma membrane | 52.23 | 52.23 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 52.23 | 52.23 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 52.23 | 51.9 |
| OQU81217 | Sorghum | extracellular | 51.59 | 51.59 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 50.96 | 50.96 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 50.96 | 50.96 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 35.03 | 50.93 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 50.32 | 50.32 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 50.96 | 50.0 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 49.68 | 49.68 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 49.68 | 49.68 |
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 49.04 | 48.73 |
| Os10t0445500-01 | Rice | plasma membrane | 48.41 | 48.1 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 36.94 | 46.77 |
| CDY10063 | Canola | plasma membrane | 43.95 | 38.12 |
| PGSC0003DMT400042097 | Potato | cytosol | 44.59 | 35.9 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 50.96 | 33.06 |
Protein Annotations
| EMBL:ACUP02006605 | EMBL:BT095004 | EnsemblPlants:KRH34500 | EnsemblPlantsGene:GLYMA_10G187900 | EntrezGene:100808577 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:HR_lesion | PANTHER:PTHR31474 | PANTHER:PTHR31474:SF4 | PFAM:PF05514 |
| ProteinID:KRH34500 | ProteinID:KRH34500.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001B15D3B |
| UniProt:C6TBT3 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:42092932..42095377
Molecular Weight (calculated)
17685.0 Da
IEP (calculated)
10.167
GRAVY (calculated)
0.443
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSSFLGRV LFASLFILSA WQMFNEFDDN GGPIVKELIP KLTVVRRNLS SKLGVAIPDI NVRTVIASTM LLKGVGGVLF VLGSTFGSYL LLLYLGISTP
101: ILYDFYNYRS NIPEYYLLLN DFIQSTALCG ALLFFIEMKY SITRRQMRKK TPKAKTV
101: ILYDFYNYRS NIPEYYLLLN DFIQSTALCG ALLFFIEMKY SITRRQMRKK TPKAKTV
001: MGFFSFLGRV LFASLFILSA WQMFNDFGTD GGPAAKELAP KLDLTKAHLS SILGVSLPNL EVKQVVWAIV ALKGLGGLLF VIGNIFGAYL LAVYLVVVSP
101: ILYDFYNYGP EDRQFSLLLT EFLQSVALLG ALLFFIGMKN STTSSKRILK KRTPKPKAA
101: ILYDFYNYGP EDRQFSLLLT EFLQSVALLG ALLFFIGMKN STTSSKRILK KRTPKPKAA
Arabidopsis Description
At1g04340/F19P19_23 [Source:UniProtKB/TrEMBL;Acc:O22690]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.