Factsheet for Zm00001d025020_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001820_P001
Zm00001d013937_P001
Zm00001d017390_P001
Zm00001d017768_P006
Zm00001d020667_P001
Zm00001d025939_P003
Zm00001d032576_P001
Zm00001d036342_P001
Zm00001d038964_P001
Zm00001d049553_P001
Zm00001d051288_P001
Zm00001d051562_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04340.1	Zm00001d001820_P001	AT1G03630.1	21798944
AT1G04340.1	Zm00001d013937_P001	AT1G03630.1	21798944
AT1G04340.1	Zm00001d032576_P001	AT1G03630.1	21798944
AT1G04340.1	Zm00001d017768_P006	AT3G50910.1	21798944
AT1G04340.1	Zm00001d020667_P001	AT3G50910.1	21798944
AT1G04340.1	Zm00001d038964_P001	AT3G50910.1	21798944
AT1G04340.1	Zm00001d051562_P001	AT3G50910.1	21798944
AT5G43460.1	Zm00001d017390_P001	AT3G60600.1	21798944
AT5G43460.1	Zm00001d025939_P003	AT3G60600.1	21798944
AT5G43460.1	Zm00001d036342_P001	AT3G60600.1	21798944
AT5G43460.1	Zm00001d049553_P001	AT3G60600.1	21798944
AT5G43460.1	Zm00001d051288_P001	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU81217	Sorghum	extracellular	61.16	94.27
Os04t0181100-01	Rice	plasma membrane	53.31	82.17
TraesCS2D01G029000.1	Wheat	extracellular	50.41	77.71
TraesCS2A01G026900.1	Wheat	extracellular	50.0	77.07
TraesCS2B01G040200.1	Wheat	extracellular	49.59	76.43
GSMUA_Achr4P26720_001	Banana	extracellular	47.52	73.72
GSMUA_Achr1P01370_001	Banana	extracellular	46.69	72.44
GSMUA_Achr8P14320_001	Banana	plasma membrane	44.63	68.35
Zm00001d048402_P001	Maize	extracellular, golgi, plasma membrane	43.8	67.52
Zm00001d027680_P003	Maize	endoplasmic reticulum, extracellular, plasma membrane	45.04	66.46
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular, plasma membrane	42.56	65.61
Zm00001d032568_P001	Maize	endoplasmic reticulum, extracellular, vacuole	28.93	64.81
Zm00001d018662_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	40.91	61.88
KRH32166	Soybean	endoplasmic reticulum	38.43	59.62
KRH67349	Soybean	plasma membrane	38.43	59.24
Zm00001d032483_P001	Maize	endoplasmic reticulum, extracellular, vacuole	29.75	58.06
KRG95647	Soybean	plasma membrane	37.19	57.32
KRH19536	Soybean	endoplasmic reticulum	36.78	57.05
VIT_05s0049g00200.t01	Wine grape	extracellular	36.78	56.69
Bra041032.1-P	Field mustard	extracellular	35.95	55.77
CDY12771	Canola	extracellular	35.95	55.77
Solyc09g089670.2.1	Tomato	extracellular, plasma membrane, vacuole	36.78	55.28
CDY49421	Canola	extracellular	35.54	55.13
CDY47153	Canola	endoplasmic reticulum	35.95	55.06
CDY12466	Canola	endoplasmic reticulum	35.95	55.06
Bra039861.1-P	Field mustard	plasma membrane	35.54	54.43
AT4G14420.1	Thale cress	plasma membrane	35.12	53.8
CDY59304	Canola	plasma membrane	34.3	52.87
Solyc03g005470.2.1	Tomato	plastid	34.3	52.53
Bra027498.1-P	Field mustard	plasma membrane	33.88	52.23
CDY32939	Canola	plasma membrane	33.88	52.23
AT5G43460.1	Thale cress	extracellular	33.06	51.95
AT1G04340.1	Thale cress	plasma membrane	33.88	51.57
Bra015305.1-P	Field mustard	extracellular, plasma membrane, vacuole	34.3	51.23
CDY60669	Canola	extracellular, plasma membrane, vacuole	34.3	51.23
KRH34500	Soybean	extracellular	33.06	50.96
KRH31721	Soybean	endoplasmic reticulum	33.06	50.96
KRG92302	Soybean	extracellular	33.06	50.96
CDY15499	Canola	plasma membrane	34.71	50.91
Bra030565.1-P	Field mustard	plasma membrane	34.71	50.91
CDY18220	Canola	extracellular, plasma membrane, vacuole	33.88	50.62
CDX86640	Canola	extracellular, plasma membrane, vacuole	34.3	50.61
KRG90387	Soybean	extracellular	32.64	50.32
Solyc06g053660.2.1	Tomato	plasma membrane	31.82	49.04
PGSC0003DMT400044245	Potato	cytosol	30.58	41.81
VIT_05s0049g00210.t01	Wine grape	plastid	38.84	40.87
PGSC0003DMT400034860	Potato	plastid	29.34	38.59
CDY10063	Canola	plasma membrane	26.45	35.36
KRH73866	Soybean	plastid	21.49	34.9
PGSC0003DMT400042097	Potato	cytosol	26.86	33.33

Protein Annotations

EnsemblPlants:Zm00001d025020_P001	EnsemblPlants:Zm00001d025020_T001	EnsemblPlantsGene:Zm00001d025020	EntrezGene:100279232	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:HR_lesion	PANTHER:PTHR31474	PANTHER:PTHR31474:SF5	PFAM:PF05514	ProteinID:AQK42741.1
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00084497F1	UniProt:A0A1D6J434	MapMan:35.2

Description

HR-like lesion-inducing protein-related

Coordinates

chr10:-:99992757..99998341

Molecular Weight (calculated)

27139.0 Da

IEP (calculated)

10.836

GRAVY (calculated)

0.533

Length

242 amino acids

Sequence
(BLAST)

001: MGFISFVGRV LFASLFLLSA YQEYVSPLLP RLARTPLRSH LVLVSSARRQ IEAAPFPLGR LSVGCFRLDL ALVARVRTCS IEILPLRASH IRIPELVSVY
101: TCIFMYSRFI EFGNDGGPAA KTLKPKFNLF VKLVSKNTGL GVPHIDIKTV IAATMFLKGF GGLLFIVSSS FGAFLLLIYL AFITPIVYDF YNHEMESTLF
201: VDLFFKFIQN LAFMGALLFF LGMKNSIPKR RSKGRTTKTK TN

Best Arabidopsis Sequence Match ( AT5G43460.1 )
(BLAST)

001: MGFFSFLGRV LFASLFILSA WQMFNDGGPA AKELAPKLDL VKAHLSSRLG VTLPKIEVRQ VVATIIALKG VGGLLFVIGN TFGAYLLASY LVVFGPILYD
101: FYNYGPQERH FSLLLTEFLQ SVALFGALLF FIGMKNSTPA KKNLKKRTPK PKAA

Arabidopsis Description

At5g43460/MWF20_18 [Source:UniProtKB/TrEMBL;Acc:Q9LSW5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.