Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g005470.2.1 | Tomato | plastid | 75.16 | 76.58 |
| PGSC0003DMT400044245 | Potato | cytosol | 83.23 | 75.71 |
| CDY12466 | Canola | endoplasmic reticulum | 68.94 | 70.25 |
| CDY47153 | Canola | endoplasmic reticulum | 68.94 | 70.25 |
| Bra039861.1-P | Field mustard | plasma membrane | 68.32 | 69.62 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 66.46 | 68.59 |
| AT4G14420.1 | Thale cress | plasma membrane | 66.46 | 67.72 |
| Bra041032.1-P | Field mustard | extracellular | 63.98 | 66.03 |
| CDY12771 | Canola | extracellular | 63.98 | 66.03 |
| KRH32166 | Soybean | endoplasmic reticulum | 63.98 | 66.03 |
| Os03t0149200-01 | Rice | extracellular | 63.98 | 65.61 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 63.35 | 65.38 |
| CDY49421 | Canola | extracellular | 63.35 | 65.38 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 62.11 | 63.69 |
| KRG95647 | Soybean | plasma membrane | 61.49 | 63.06 |
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 61.49 | 62.66 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 61.49 | 62.66 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 60.87 | 62.42 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 60.87 | 62.42 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 60.87 | 62.42 |
| EER92848 | Sorghum | extracellular | 60.87 | 62.42 |
| KRH19536 | Soybean | endoplasmic reticulum | 60.25 | 62.18 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 60.25 | 61.78 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 60.25 | 61.78 |
| KRH67349 | Soybean | plasma membrane | 60.25 | 61.78 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 62.73 | 61.59 |
| Os04t0181100-01 | Rice | plasma membrane | 59.01 | 60.51 |
| Os10t0445500-01 | Rice | plasma membrane | 58.39 | 59.49 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 57.76 | 59.24 |
| OQU81217 | Sorghum | extracellular | 57.76 | 59.24 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 57.14 | 58.6 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 57.14 | 58.6 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 38.51 | 57.41 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 55.9 | 56.25 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 39.75 | 51.61 |
| VIT_05s0049g00210.t01 | Wine grape | plastid | 67.7 | 47.39 |
| Solyc06g053660.2.1 | Tomato | plasma membrane | 44.72 | 45.86 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 55.28 | 36.78 |
Protein Annotations
| EnsemblPlants:Solyc09g089670.2.1 | EnsemblPlantsGene:Solyc09g089670.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:HR_lesion |
| PANTHER:PTHR31474 | PANTHER:PTHR31474:SF1 | PFAM:PF05514 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI000276C93F | UniProt:K4CVZ3 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr9:+:69436651..69439453
Molecular Weight (calculated)
17564.7 Da
IEP (calculated)
10.439
GRAVY (calculated)
0.415
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MATMSFVGRL LFVSVFVLSA YQEFSEFGSD GGPAAKALAP KFNVLSKHVA THIGFELPHV EMKHLILGAI VLKGLGSLLF VFGSTLGALL LLIHQAVASP
101: VLYDFYNYDV DKKEFVQLFF KFSQNLALLG ALLFFIGMKN SMPRRSSSSS SKKKGPKAKA N
101: VLYDFYNYDV DKKEFVQLFF KFSQNLALLG ALLFFIGMKN SMPRRSSSSS SKKKGPKAKA N
001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
Arabidopsis Description
AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.