Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12466 | Canola | endoplasmic reticulum | 93.67 | 93.67 |
| CDY47153 | Canola | endoplasmic reticulum | 93.67 | 93.67 |
| Bra039861.1-P | Field mustard | plasma membrane | 92.41 | 92.41 |
| Bra041032.1-P | Field mustard | extracellular | 87.97 | 89.1 |
| CDY49421 | Canola | extracellular | 87.34 | 88.46 |
| CDY12771 | Canola | extracellular | 86.71 | 87.82 |
| Solyc03g005470.2.1 | Tomato | plastid | 67.09 | 67.09 |
| Solyc09g089670.2.1 | Tomato | extracellular, plasma membrane, vacuole | 67.72 | 66.46 |
| KRH32166 | Soybean | endoplasmic reticulum | 65.19 | 66.03 |
| KRG95647 | Soybean | plasma membrane | 65.19 | 65.61 |
| KRH67349 | Soybean | plasma membrane | 63.29 | 63.69 |
| KRH19536 | Soybean | endoplasmic reticulum | 61.39 | 62.18 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 61.39 | 61.39 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 59.49 | 60.26 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 58.86 | 59.24 |
| Os03t0149200-01 | Rice | extracellular | 58.86 | 59.24 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 58.23 | 58.97 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 58.23 | 58.6 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 58.23 | 58.6 |
| EER92848 | Sorghum | extracellular | 57.59 | 57.96 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 57.59 | 57.96 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 60.13 | 57.93 |
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 57.59 | 57.59 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 39.24 | 57.41 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 56.96 | 57.32 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 56.96 | 57.32 |
| Os10t0445500-01 | Rice | plasma membrane | 56.96 | 56.96 |
| OQU81217 | Sorghum | extracellular | 56.33 | 56.69 |
| Os04t0181100-01 | Rice | plasma membrane | 55.06 | 55.41 |
| AT1G04340.1 | Thale cress | plasma membrane | 54.43 | 54.09 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 53.16 | 53.5 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 52.53 | 52.87 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 51.9 | 52.23 |
| PGSC0003DMT400044245 | Potato | cytosol | 58.23 | 51.98 |
| AT5G43460.1 | Thale cress | extracellular | 50.63 | 51.95 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 52.53 | 51.88 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 39.24 | 50.0 |
| PGSC0003DMT400034860 | Potato | plastid | 58.23 | 50.0 |
| VIT_05s0049g00210.t01 | Wine grape | plastid | 67.09 | 46.09 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 53.8 | 35.12 |
Protein Annotations
| MapMan:35.2 | EntrezGene:827087 | UniProt:A0A178V3W1 | ProteinID:AEE83443.1 | ArrayExpress:AT4G14420 | EnsemblPlantsGene:AT4G14420 |
| RefSeq:AT4G14420 | TAIR:AT4G14420 | RefSeq:AT4G14420-TAIR-G | EnsemblPlants:AT4G14420.1 | TAIR:AT4G14420.1 | EMBL:AY045601 |
| EMBL:AY085699 | EMBL:AY090326 | ProteinID:CAB10221.1 | ProteinID:CAB78484.1 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:HR_lesion | RefSeq:NP_193178.1 | UniProt:O23298 | ProteinID:OAO99561.1 | PFAM:PF05514 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR31474 | PANTHER:PTHR31474:SF1 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00000A25F1 |
| SEG:seg | : | : | : | : | : |
Description
AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
Coordinates
chr4:-:8301851..8303996
Molecular Weight (calculated)
17428.4 Da
IEP (calculated)
10.585
GRAVY (calculated)
0.161
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.