Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 8
- endoplasmic reticulum 6
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12466 | Canola | endoplasmic reticulum | 98.73 | 98.73 |
| CDY47153 | Canola | endoplasmic reticulum | 98.73 | 98.73 |
| AT4G14420.1 | Thale cress | plasma membrane | 92.41 | 92.41 |
| Bra041032.1-P | Field mustard | extracellular | 90.51 | 91.67 |
| Solyc09g089670.2.1 | Tomato | extracellular, plasma membrane, vacuole | 69.62 | 68.32 |
| KRH32166 | Soybean | endoplasmic reticulum | 65.19 | 66.03 |
| Solyc03g005470.2.1 | Tomato | plastid | 65.82 | 65.82 |
| KRG95647 | Soybean | plasma membrane | 64.56 | 64.97 |
| KRH67349 | Soybean | plasma membrane | 63.29 | 63.69 |
| KRH19536 | Soybean | endoplasmic reticulum | 61.39 | 62.18 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 62.03 | 62.03 |
| Os03t0149200-01 | Rice | extracellular | 60.76 | 61.15 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 60.13 | 60.9 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 60.13 | 60.51 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 59.49 | 59.87 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 59.49 | 59.87 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 62.03 | 59.76 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 58.86 | 59.62 |
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 59.49 | 59.49 |
| EER92848 | Sorghum | extracellular | 58.86 | 59.24 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 58.86 | 59.24 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 58.23 | 58.6 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 58.23 | 58.6 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 39.87 | 58.33 |
| Os10t0445500-01 | Rice | plasma membrane | 57.59 | 57.59 |
| OQU81217 | Sorghum | extracellular | 56.96 | 57.32 |
| Os04t0181100-01 | Rice | plasma membrane | 55.7 | 56.05 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 53.8 | 54.14 |
| Bra027498.1-P | Field mustard | plasma membrane | 53.8 | 54.14 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 53.16 | 53.5 |
| PGSC0003DMT400044245 | Potato | cytosol | 59.49 | 53.11 |
| Bra015305.1-P | Field mustard | extracellular, plasma membrane, vacuole | 54.43 | 53.09 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 52.53 | 52.87 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 53.16 | 52.5 |
| Bra030565.1-P | Field mustard | plasma membrane | 54.43 | 52.12 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 39.87 | 50.81 |
| PGSC0003DMT400034860 | Potato | plastid | 56.96 | 48.91 |
| VIT_05s0049g00210.t01 | Wine grape | plastid | 68.35 | 46.96 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 54.43 | 35.54 |
Protein Annotations
| EnsemblPlants:Bra039861.1 | EnsemblPlants:Bra039861.1-P | EnsemblPlantsGene:Bra039861 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:HR_lesion | PANTHER:PTHR31474 | PANTHER:PTHR31474:SF1 | PFAM:PF05514 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000254582F | UniProt:M4FFI7 | MapMan:35.2 | : | : |
Description
AT4G14420 (E=1e-052) | lesion inducing protein-related
Coordinates
chrA08:-:6235563..6236769
Molecular Weight (calculated)
17406.3 Da
IEP (calculated)
10.629
GRAVY (calculated)
0.218
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MELASFVGRA LFVSVFLLSA WQEFDGFGDD GGRAAKSLRP KFNAFVSHVT THTGQQLPPV DMKILVAAAI ALKGIGGLFF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DKKEFSQLFS KFTQSLALLG ALLFFIGMKN SRRHGRQLRK KAPKAKAN
101: ILYDFYNYDV DKKEFSQLFS KFTQSLALLG ALLFFIGMKN SRRHGRQLRK KAPKAKAN
001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
Arabidopsis Description
AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.