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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P12060_001
GSMUA_Achr1P20280_001
GSMUA_Achr2P22980_001
GSMUA_Achr3P14270_001
GSMUA_Achr5P20880_001
GSMUA_Achr6P08980_001
GSMUA_Achr7P04280_001
GSMUA_Achr8P11120_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04340.1 GSMUA_Achr11P... AT1G03630.1 21798944
AT1G04340.1 GSMUA_Achr3P14270_001 AT1G03630.1 21798944
AT1G04340.1 GSMUA_Achr7P04280_001 AT1G03630.1 21798944
AT1G04340.1 GSMUA_Achr1P12060_001 AT3G50910.1 21798944
AT1G04340.1 GSMUA_Achr2P22980_001 AT3G50910.1 21798944
AT1G04340.1 GSMUA_Achr6P08980_001 AT3G50910.1 21798944
AT5G43460.1 GSMUA_Achr11P... AT3G60600.1 21798944
AT5G43460.1 GSMUA_Achr11P... AT3G60600.1 21798944
AT5G43460.1 GSMUA_Achr1P20280_001 AT3G60600.1 21798944
AT5G43460.1 GSMUA_Achr5P20880_001 AT3G60600.1 21798944
AT5G43460.1 GSMUA_Achr8P11120_001 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P26720_001 Banana extracellular 88.46 88.46
GSMUA_Achr8P14320_001 Banana plasma membrane 82.69 81.65
GSMUA_Achr11P... Banana endoplasmic reticulum, extracellular, plasma membrane 81.41 80.89
Os03t0149200-01 Rice extracellular 80.77 80.25
HORVU4Hr1G080140.1 Barley extracellular 78.85 78.34
TraesCS4D01G312900.1 Wheat extracellular 78.85 78.34
TraesCS4B01G316300.1 Wheat extracellular 78.85 78.34
TraesCS4A01G415500.1 Wheat extracellular 78.21 77.71
Os04t0181100-01 Rice plasma membrane 75.0 74.52
GSMUA_Achr2P04100_001 Banana extracellular 73.72 72.78
OQU81217 Sorghum extracellular 73.08 72.61
EER92848 Sorghum extracellular 73.08 72.61
Zm00001d048402_P001 Maize extracellular, golgi, plasma membrane 72.44 71.97
TraesCS2B01G040200.1 Wheat extracellular 72.44 71.97
TraesCS2D01G029000.1 Wheat extracellular 71.79 71.34
TraesCS2A01G026900.1 Wheat extracellular 71.79 71.34
Zm00001d027680_P003 Maize endoplasmic reticulum, extracellular, plasma membrane 74.36 70.73
Zm00001d032568_P001 Maize endoplasmic reticulum, extracellular, vacuole 48.72 70.37
Os10t0445500-01 Rice plasma membrane 70.51 69.62
Zm00001d018662_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 69.23 67.5
KRH32166 Soybean endoplasmic reticulum 66.67 66.67
Solyc09g089670.2.1 Tomato extracellular, plasma membrane, vacuole 68.59 66.46
KRH67349 Soybean plasma membrane 66.03 65.61
KRG95647 Soybean plasma membrane 65.38 64.97
KRH19536 Soybean endoplasmic reticulum 64.74 64.74
Zm00001d032483_P001 Maize endoplasmic reticulum, extracellular, vacuole 51.28 64.52
Solyc03g005470.2.1 Tomato plastid 64.1 63.29
VIT_05s0049g00200.t01 Wine grape extracellular 62.82 62.42
CDY47153 Canola endoplasmic reticulum 61.54 60.76
CDY12466 Canola endoplasmic reticulum 61.54 60.76
Bra039861.1-P Field mustard plasma membrane 60.9 60.13
Bra041032.1-P Field mustard extracellular 59.62 59.62
CDY12771 Canola extracellular 59.62 59.62
AT4G14420.1 Thale cress plasma membrane 60.26 59.49
CDY49421 Canola extracellular 58.97 58.97
KRG90387 Soybean extracellular 55.77 55.41
KRH31721 Soybean endoplasmic reticulum 55.13 54.78
KRG92302 Soybean extracellular 55.13 54.78
CDY59304 Canola plasma membrane 55.13 54.78
AT5G43460.1 Thale cress extracellular 53.21 53.9
KRH34500 Soybean extracellular 53.85 53.5
Bra027498.1-P Field mustard plasma membrane 53.85 53.5
CDY32939 Canola plasma membrane 53.85 53.5
PGSC0003DMT400044245 Potato cytosol 60.26 53.11
AT1G04340.1 Thale cress plasma membrane 53.21 52.2
CDY60669 Canola extracellular, plasma membrane, vacuole 53.21 51.23
CDY18220 Canola extracellular, plasma membrane, vacuole 53.21 51.23
Bra015305.1-P Field mustard extracellular, plasma membrane, vacuole 53.21 51.23
CDX86640 Canola extracellular, plasma membrane, vacuole 53.21 50.61
CDY15499 Canola plasma membrane 53.21 50.3
Bra030565.1-P Field mustard plasma membrane 53.21 50.3
PGSC0003DMT400034860 Potato plastid 58.97 50.0
Solyc06g053660.2.1 Tomato plasma membrane 48.08 47.77
Zm00001d025020_P001 Maize extracellular, golgi, plasma membrane 72.44 46.69
VIT_05s0049g00210.t01 Wine grape plastid 66.67 45.22
KRH73866 Soybean plastid 37.18 38.93
PGSC0003DMT400042097 Potato cytosol 42.95 34.36
CDY10063 Canola plasma membrane 39.74 34.25
Protein Annotations
EnsemblPlants:GSMUA_Achr1P01370_001EnsemblPlants:GSMUA_Achr1T01370_001EnsemblPlantsGene:GSMUA_Achr1G01370_001GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:HR_lesionPANTHER:PTHR31474PANTHER:PTHR31474:SF5PFAM:PF05514SEG:segSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI00029485A5UniProt:M0RW45MapMan:35.2::
Description
nicotiana lesion-inducing like, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G01370_001]
Coordinates
chr1:-:1079986..1084680
Molecular Weight (calculated)
17446.7 Da
IEP (calculated)
10.401
GRAVY (calculated)
0.441
Length
156 amino acids
Sequence
(BLAST)
001: MGFVSFAGRV LFASVFLLSA YQEFSEFGVN GGPAAKALKP KFNLFMKHAS SHIGFEVPHV EMRQVIAGTI FLKGLGGLLF IFSSSFGAYL LLLYLAFITP
101: VMYDFYNYDV EKSEFVQLFS KFIQNLALIG ALLFFLGMKN SIPKRPKKKV SKTKTN
Best Arabidopsis Sequence Match ( AT4G14420.1 )
(BLAST)
001: MELASFLGRA LFVSVFLLSA WQEFNDFGED GGRSAKSLKP KFNAFVNHVT THTGQQLPPV DMKILVAAAI ALKGIGGLLF VFGSSLGAYL LLLHQAVATP
101: ILYDFYNYDV DRKEFGQLFS KFTQSLALLG GLLFFIGMKN SRKHGRQLRK KAPKAKAN
Arabidopsis Description
AT4g14420/dl3250c [Source:UniProtKB/TrEMBL;Acc:O23298]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.