Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030565.1-P | Field mustard | plasma membrane | 99.39 | 99.39 |
| CDX86640 | Canola | extracellular, plasma membrane, vacuole | 92.73 | 93.29 |
| CDY60669 | Canola | extracellular, plasma membrane, vacuole | 88.48 | 90.12 |
| AT1G04340.1 | Thale cress | plasma membrane | 86.67 | 89.94 |
| CDY18220 | Canola | extracellular, plasma membrane, vacuole | 87.27 | 88.89 |
| CDY32939 | Canola | plasma membrane | 81.21 | 85.35 |
| CDY59304 | Canola | plasma membrane | 80.61 | 84.71 |
| CDY10063 | Canola | plasma membrane | 68.48 | 62.43 |
| VIT_05s0049g00200.t01 | Wine grape | extracellular | 58.79 | 61.78 |
| KRG92302 | Soybean | extracellular | 58.18 | 61.15 |
| KRH34500 | Soybean | extracellular | 57.58 | 60.51 |
| KRH31721 | Soybean | endoplasmic reticulum | 56.36 | 59.24 |
| KRG90387 | Soybean | extracellular | 56.36 | 59.24 |
| TraesCS4A01G415500.1 | Wheat | extracellular | 54.55 | 57.32 |
| Solyc06g053660.2.1 | Tomato | plasma membrane | 53.94 | 56.69 |
| Os03t0149200-01 | Rice | extracellular | 53.94 | 56.69 |
| Zm00001d032568_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 36.97 | 56.48 |
| HORVU4Hr1G080140.1 | Barley | extracellular | 53.33 | 56.05 |
| CDY49421 | Canola | extracellular | 52.73 | 55.77 |
| GSMUA_Achr2P04100_001 | Banana | extracellular | 53.33 | 55.7 |
| CDY47153 | Canola | endoplasmic reticulum | 53.33 | 55.7 |
| CDY12466 | Canola | endoplasmic reticulum | 53.33 | 55.7 |
| TraesCS4B01G316300.1 | Wheat | extracellular | 52.73 | 55.41 |
| EER92848 | Sorghum | extracellular | 52.73 | 55.41 |
| TraesCS4D01G312900.1 | Wheat | extracellular | 52.73 | 55.41 |
| GSMUA_Achr4P26720_001 | Banana | extracellular | 52.12 | 55.13 |
| CDY12771 | Canola | extracellular | 51.52 | 54.49 |
| Zm00001d048402_P001 | Maize | extracellular, golgi, plasma membrane | 51.52 | 54.14 |
| Os04t0181100-01 | Rice | plasma membrane | 50.91 | 53.5 |
| OQU81217 | Sorghum | extracellular | 50.91 | 53.5 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular, plasma membrane | 50.91 | 53.5 |
| GSMUA_Achr1P01370_001 | Banana | extracellular | 50.3 | 53.21 |
| Os10t0445500-01 | Rice | plasma membrane | 50.91 | 53.16 |
| Zm00001d027680_P003 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 52.73 | 53.05 |
| TraesCS2D01G029000.1 | Wheat | extracellular | 49.7 | 52.23 |
| TraesCS2B01G040200.1 | Wheat | extracellular | 49.09 | 51.59 |
| TraesCS2A01G026900.1 | Wheat | extracellular | 49.09 | 51.59 |
| GSMUA_Achr8P14320_001 | Banana | plasma membrane | 49.09 | 51.27 |
| Zm00001d032483_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 38.18 | 50.81 |
| Zm00001d018662_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 47.88 | 49.38 |
| KRH73866 | Soybean | plastid | 36.36 | 40.27 |
| PGSC0003DMT400042097 | Potato | cytosol | 43.64 | 36.92 |
| Zm00001d025020_P001 | Maize | extracellular, golgi, plasma membrane | 50.91 | 34.71 |
Protein Annotations
| EnsemblPlants:CDY15499 | EnsemblPlantsGene:GSBRNA2T00089669001 | GO:A0A078FRJ0 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:HR_lesion | PANTHER:PTHR31474 | PANTHER:PTHR31474:SF4 | PFAM:PF05514 | ProteinID:CDY15499 | ProteinID:CDY15499.1 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EDFE4C | UniProt:A0A078FRJ0 | MapMan:35.2 |
Description
BnaA08g27830DBnaA08g27830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRJ0]
Coordinates
chrLK032055:-:261712..263123
Molecular Weight (calculated)
17967.2 Da
IEP (calculated)
10.337
GRAVY (calculated)
0.503
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFFSFLGRV LFASLFILSA WQMFNDFGSD GGPAAKELAP KLHLAKAHLS SRLGVALPDI EVKHVVWAIV GLKGLGGLLF VVGNIFGAYL LVVYLVVVSP
101: ILYDFYNYGP QDREFSLLFT EFLQSVALLG ALLFFIGMKN STTTSSSSSS AKRNLKKRTP KPKAA
101: ILYDFYNYGP QDREFSLLFT EFLQSVALLG ALLFFIGMKN STTTSSSSSS AKRNLKKRTP KPKAA
001: MGFFSFLGRV LFASLFILSA WQMFNDFGTD GGPAAKELAP KLDLTKAHLS SILGVSLPNL EVKQVVWAIV ALKGLGGLLF VIGNIFGAYL LAVYLVVVSP
101: ILYDFYNYGP EDRQFSLLLT EFLQSVALLG ALLFFIGMKN STTSSKRILK KRTPKPKAA
101: ILYDFYNYGP EDRQFSLLLT EFLQSVALLG ALLFFIGMKN STTSSKRILK KRTPKPKAA
Arabidopsis Description
At1g04340/F19P19_23 [Source:UniProtKB/TrEMBL;Acc:O22690]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.