CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015305.1-P	Field mustard	extracellular, plasma membrane, vacuole	98.15	98.15
CDY60669	Canola	extracellular, plasma membrane, vacuole	97.53	97.53
CDY15499	Canola	plasma membrane	88.89	87.27
CDY32939	Canola	plasma membrane	83.95	86.62
CDX86640	Canola	extracellular, plasma membrane, vacuole	87.65	86.59
CDY59304	Canola	plasma membrane	82.1	84.71
CDY10063	Canola	plasma membrane	69.75	62.43
VIT_05s0049g00200.t01	Wine grape	extracellular	59.88	61.78
KRG92302	Soybean	extracellular	59.26	61.15
KRH34500	Soybean	extracellular	58.64	60.51
KRH31721	Soybean	endoplasmic reticulum	58.64	60.51
KRG90387	Soybean	extracellular	58.64	60.51
Solyc06g053660.2.1	Tomato	plasma membrane	55.56	57.32
CDY49421	Canola	extracellular	53.7	55.77
TraesCS4A01G415500.1	Wheat	extracellular	53.7	55.41
CDY12466	Canola	endoplasmic reticulum	53.7	55.06
CDY47153	Canola	endoplasmic reticulum	53.7	55.06
Os03t0149200-01	Rice	extracellular	53.09	54.78
CDY12771	Canola	extracellular	52.47	54.49
Zm00001d048402_P001	Maize	extracellular, golgi, plasma membrane	52.47	54.14
Zm00001d032568_P001	Maize	endoplasmic reticulum, extracellular, vacuole	35.8	53.7
TraesCS4D01G312900.1	Wheat	extracellular	51.85	53.5
HORVU4Hr1G080140.1	Barley	extracellular	51.85	53.5
EER92848	Sorghum	extracellular	51.85	53.5
TraesCS4B01G316300.1	Wheat	extracellular	51.85	53.5
Os04t0181100-01	Rice	plasma membrane	51.85	53.5
GSMUA_Achr1P01370_001	Banana	extracellular	51.23	53.21
GSMUA_Achr4P26720_001	Banana	extracellular	51.23	53.21
OQU81217	Sorghum	extracellular	51.23	52.87
GSMUA_Achr2P04100_001	Banana	extracellular	51.23	52.53
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular, plasma membrane	50.62	52.23
Zm00001d027680_P003	Maize	endoplasmic reticulum, extracellular, plasma membrane	52.47	51.83
TraesCS2D01G029000.1	Wheat	extracellular	50.0	51.59
TraesCS2A01G026900.1	Wheat	extracellular	49.38	50.96
TraesCS2B01G040200.1	Wheat	extracellular	49.38	50.96
Os10t0445500-01	Rice	plasma membrane	49.38	50.63
GSMUA_Achr8P14320_001	Banana	plasma membrane	48.77	50.0
Zm00001d032483_P001	Maize	endoplasmic reticulum, extracellular, vacuole	37.04	48.39
Zm00001d018662_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	47.53	48.12
KRH73866	Soybean	plastid	36.42	39.6
PGSC0003DMT400042097	Potato	cytosol	45.68	37.95
Zm00001d025020_P001	Maize	extracellular, golgi, plasma membrane	50.62	33.88

Protein Annotations

EnsemblPlants:CDY18220	EnsemblPlantsGene:GSBRNA2T00002749001	GO:A0A078FUV0	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:HR_lesion	PANTHER:PTHR31474	PANTHER:PTHR31474:SF4	PFAM:PF05514	ProteinID:CDY18220	ProteinID:CDY18220.1
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEC4B6	UniProt:A0A078FUV0	MapMan:35.2

Description

BnaC05g02430DBnaC05g02430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUV0]

Coordinates

chrLK032083:-:389495..390989

Molecular Weight (calculated)

17531.7 Da

IEP (calculated)

10.337

GRAVY (calculated)

0.554

Length

162 amino acids

Sequence
(BLAST)

001: MGFFSFLGRV LFASLFILSA WQMFNDFGAD GGPAAKELAP KLGLAKSHLS SRLGVALPDI EVKQVVSVIV ALKGLGGLLF VVGNIFGAYL LAFYLVVVSP
101: ILYDFYNYGP EDRQFSLLLA EFLQSVALLG ALLFFIGMKN SRTTTSSKSS NLKKRTPKPK AA

Best Arabidopsis Sequence Match ( AT1G04340.1 )
(BLAST)

001: MGFFSFLGRV LFASLFILSA WQMFNDFGTD GGPAAKELAP KLDLTKAHLS SILGVSLPNL EVKQVVWAIV ALKGLGGLLF VIGNIFGAYL LAVYLVVVSP
101: ILYDFYNYGP EDRQFSLLLT EFLQSVALLG ALLFFIGMKN STTSSKRILK KRTPKPKAA

Arabidopsis Description

At1g04340/F19P19_23 [Source:UniProtKB/TrEMBL;Acc:O22690]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.