Factsheet for Zm00001d032483_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 4
golgi 3
plasma membrane 3
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001820_P001
Zm00001d013937_P001
Zm00001d017390_P001
Zm00001d017768_P006
Zm00001d020667_P001
Zm00001d025939_P003
Zm00001d032576_P001
Zm00001d036342_P001
Zm00001d038964_P001
Zm00001d049553_P001
Zm00001d051288_P001
Zm00001d051562_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04340.1	Zm00001d001820_P001	AT1G03630.1	21798944
AT1G04340.1	Zm00001d013937_P001	AT1G03630.1	21798944
AT1G04340.1	Zm00001d032576_P001	AT1G03630.1	21798944
AT1G04340.1	Zm00001d017768_P006	AT3G50910.1	21798944
AT1G04340.1	Zm00001d020667_P001	AT3G50910.1	21798944
AT1G04340.1	Zm00001d038964_P001	AT3G50910.1	21798944
AT1G04340.1	Zm00001d051562_P001	AT3G50910.1	21798944
AT5G43460.1	Zm00001d017390_P001	AT3G60600.1	21798944
AT5G43460.1	Zm00001d025939_P003	AT3G60600.1	21798944
AT5G43460.1	Zm00001d036342_P001	AT3G60600.1	21798944
AT5G43460.1	Zm00001d049553_P001	AT3G60600.1	21798944
AT5G43460.1	Zm00001d051288_P001	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032568_P001	Maize	endoplasmic reticulum, extracellular, vacuole	85.48	98.15
Zm00001d018662_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	91.94	71.25
Zm00001d027680_P003	Maize	endoplasmic reticulum, extracellular, plasma membrane	86.29	65.24
EER92848	Sorghum	extracellular	81.45	64.33
Zm00001d048402_P001	Maize	extracellular, golgi, plasma membrane	79.03	62.42
Os03t0149200-01	Rice	extracellular	73.39	57.96
TraesCS4D01G312900.1	Wheat	extracellular	71.77	56.69
HORVU4Hr1G080140.1	Barley	extracellular	70.97	56.05
TraesCS4A01G415500.1	Wheat	extracellular	70.97	56.05
TraesCS4B01G316300.1	Wheat	extracellular	70.16	55.41
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular, plasma membrane	66.13	52.23
GSMUA_Achr1P01370_001	Banana	extracellular	64.52	51.28
GSMUA_Achr4P26720_001	Banana	extracellular	63.71	50.64
GSMUA_Achr8P14320_001	Banana	plasma membrane	62.9	49.37
KRH67349	Soybean	plasma membrane	54.03	42.68
KRG95647	Soybean	plasma membrane	53.23	42.04
VIT_05s0049g00200.t01	Wine grape	extracellular	53.23	42.04
KRH32166	Soybean	endoplasmic reticulum	52.42	41.67
KRH19536	Soybean	endoplasmic reticulum	51.61	41.03
CDY47153	Canola	endoplasmic reticulum	51.61	40.51
CDY12466	Canola	endoplasmic reticulum	51.61	40.51
Bra041032.1-P	Field mustard	extracellular	50.81	40.38
Solyc03g005470.2.1	Tomato	plastid	50.81	39.87
Bra039861.1-P	Field mustard	plasma membrane	50.81	39.87
Solyc09g089670.2.1	Tomato	extracellular, plasma membrane, vacuole	51.61	39.75
CDY49421	Canola	extracellular	50.0	39.74
AT4G14420.1	Thale cress	plasma membrane	50.0	39.24
CDY12771	Canola	extracellular	49.19	39.1
CDY59304	Canola	plasma membrane	48.39	38.22
Bra030565.1-P	Field mustard	plasma membrane	50.81	38.18
CDY15499	Canola	plasma membrane	50.81	38.18
AT5G43460.1	Thale cress	extracellular	46.77	37.66
KRG92302	Soybean	extracellular	47.58	37.58
CDX86640	Canola	extracellular, plasma membrane, vacuole	49.19	37.2
CDY60669	Canola	extracellular, plasma membrane, vacuole	48.39	37.04
Bra015305.1-P	Field mustard	extracellular, plasma membrane, vacuole	48.39	37.04
CDY18220	Canola	extracellular, plasma membrane, vacuole	48.39	37.04
KRH34500	Soybean	extracellular	46.77	36.94
CDY32939	Canola	plasma membrane	46.77	36.94
Bra027498.1-P	Field mustard	plasma membrane	46.77	36.94
AT1G04340.1	Thale cress	plasma membrane	46.77	36.48
PGSC0003DMT400044245	Potato	cytosol	50.81	35.59
KRG90387	Soybean	extracellular	44.35	35.03
KRH31721	Soybean	endoplasmic reticulum	43.55	34.39
PGSC0003DMT400034860	Potato	plastid	50.81	34.24
Solyc06g053660.2.1	Tomato	plasma membrane	41.94	33.12
KRH73866	Soybean	plastid	37.9	31.54
VIT_05s0049g00210.t01	Wine grape	plastid	58.06	31.3
Zm00001d025020_P001	Maize	extracellular, golgi, plasma membrane	58.06	29.75
CDY10063	Canola	plasma membrane	42.74	29.28
PGSC0003DMT400042097	Potato	cytosol	42.74	27.18

Protein Annotations

EnsemblPlants:Zm00001d032483_P001	EnsemblPlants:Zm00001d032483_T001	EnsemblPlantsGene:Zm00001d032483	EntrezGene:103645327	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:HR_lesion	PANTHER:PTHR31474	PANTHER:PTHR31474:SF1	PFAM:PF05514	ProteinID:ONM05201.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004DEA3B0	UniProt:A0A1D6KR41	MapMan:35.2	:

Description

HR-like lesion-inducing protein-related

Coordinates

chr1:+:228131161..228131535

Molecular Weight (calculated)

13462.9 Da

IEP (calculated)

10.568

GRAVY (calculated)

0.471

Length

124 amino acids

Sequence
(BLAST)

001: MPAGPLALEP LAFSAHLGVA VPHIELKHVV AATIGLKGLG SLLFILSSSL GAYLLLLYLA LITPIIHDFY NYDMEKAEFA GLFAKFTQDL ALIGALLFFL
101: GMKNSIPKRQ GGKKSPRRRR TRAA

Best Arabidopsis Sequence Match ( AT1G04340.1 )
(BLAST)

001: MGFFSFLGRV LFASLFILSA WQMFNDFGTD GGPAAKELAP KLDLTKAHLS SILGVSLPNL EVKQVVWAIV ALKGLGGLLF VIGNIFGAYL LAVYLVVVSP
101: ILYDFYNYGP EDRQFSLLLT EFLQSVALLG ALLFFIGMKN STTSSKRILK KRTPKPKAA

Arabidopsis Description

At1g04340/F19P19_23 [Source:UniProtKB/TrEMBL;Acc:O22690]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.