Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020667_P001 | Maize | nucleus | 26.53 | 87.97 |
| OQU85551 | Sorghum | cytosol, plastid | 85.03 | 82.78 |
| Zm00001d017768_P006 | Maize | cytosol | 81.63 | 75.79 |
| Zm00001d038964_P001 | Maize | nucleus | 71.66 | 74.35 |
| Os02t0704600-01 | Rice | nucleus | 70.07 | 67.76 |
| TraesCS6A01G272000.1 | Wheat | nucleus | 63.72 | 62.17 |
| TraesCS6D01G252200.1 | Wheat | nucleus | 62.81 | 61.69 |
| HORVU6Hr1G068770.1 | Barley | nucleus | 63.49 | 61.67 |
| TraesCS6B01G299600.1 | Wheat | nucleus | 63.72 | 61.35 |
| GSMUA_Achr1P12060_001 | Banana | plastid | 39.91 | 44.67 |
| GSMUA_Achr2P22980_001 | Banana | cytosol, nucleus, peroxisome, plastid | 40.59 | 43.03 |
| Bra037167.1-P | Field mustard | mitochondrion | 19.73 | 41.23 |
| GSMUA_Achr6P08980_001 | Banana | nucleus | 37.64 | 40.49 |
| Bra036850.1-P | Field mustard | plastid | 36.05 | 38.31 |
| CDX77962 | Canola | nucleus, plastid | 35.6 | 37.83 |
| CDX73773 | Canola | cytosol | 35.15 | 37.62 |
| CDX90677 | Canola | nucleus | 33.56 | 36.27 |
| Bra012880.1-P | Field mustard | nucleus | 33.11 | 35.78 |
| CDY28989 | Canola | nucleus | 33.56 | 35.32 |
| KRH08190 | Soybean | nucleus | 34.24 | 34.63 |
| AT3G50910.1 | Thale cress | cytosol | 34.92 | 34.45 |
| CDY18608 | Canola | nucleus | 27.44 | 33.33 |
| KRH76747 | Soybean | plastid | 32.88 | 33.26 |
| AT5G66480.1 | Thale cress | plastid | 31.97 | 31.76 |
| KRH28715 | Soybean | cytosol | 28.8 | 30.98 |
| Solyc02g085000.2.1 | Tomato | nucleus | 31.52 | 30.09 |
| PGSC0003DMT400009054 | Potato | nucleus, plastid | 32.65 | 29.94 |
| VIT_04s0023g02110.t01 | Wine grape | endoplasmic reticulum | 33.79 | 29.92 |
| CDY67893 | Canola | nucleus | 21.32 | 27.25 |
| KRH69884 | Soybean | nucleus | 32.2 | 19.61 |
Protein Annotations
| EnsemblPlants:Zm00001d051562_P001 | EnsemblPlants:Zm00001d051562_T001 | EnsemblPlantsGene:Zm00001d051562 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ncoils:Coil | PANTHER:PTHR35490 | ProteinID:AQK54547.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0008453A3E |
| UniProt:A0A1D6Q7Z2 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4:-:162800349..162804413
Molecular Weight (calculated)
47977.8 Da
IEP (calculated)
4.645
GRAVY (calculated)
-0.611
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MITHYVLTGS PAQVQKSTSK PPPSPPDKGT PVPVAPVRTQ TSPASLYATP ESTTLPDSPS SFPGTWSPYI INHKRRGASL AKTSRGDVGS GGSQPKLQVM
101: LSALPKGGEP TAAEEPEFAF QQSENGQTEG DSGVEEAPIY GKNEMLLKDK GSMSAKNEQE QPEFEFQRGS LEASVRSVNV GRPLIAGAPK NDESDTFLEL
201: QDLISVSSHT EADGAGTQER WWKPSSPLGT SVGTPGAEFY DAFEEISSDG GTRSLRGMDD DLRELRLSLL MEIERRNQAK EALEIWQKEW KKLSHHLSHV
301: ALSLPSPCIA EETDYSSMDP GAELCQQITV SQLVAAAIAQ GFARSEVESE METVLAAKNF EIARLSDRVQ YYEAANREMS QRNQEAIEMS RQQCKECKKQ
401: QKWLWGFAGL AVTLGATAIA WSYLPSSQPQ TSADSNSTTS D
101: LSALPKGGEP TAAEEPEFAF QQSENGQTEG DSGVEEAPIY GKNEMLLKDK GSMSAKNEQE QPEFEFQRGS LEASVRSVNV GRPLIAGAPK NDESDTFLEL
201: QDLISVSSHT EADGAGTQER WWKPSSPLGT SVGTPGAEFY DAFEEISSDG GTRSLRGMDD DLRELRLSLL MEIERRNQAK EALEIWQKEW KKLSHHLSHV
301: ALSLPSPCIA EETDYSSMDP GAELCQQITV SQLVAAAIAQ GFARSEVESE METVLAAKNF EIARLSDRVQ YYEAANREMS QRNQEAIEMS RQQCKECKKQ
401: QKWLWGFAGL AVTLGATAIA WSYLPSSQPQ TSADSNSTTS D
001: MPTFSAIALD RMLEPGASTS VESVPSTTNL FYSKPPISKL EKGKGKLPNE RTVTRPLMSP ALYATPDAIP LPNSPSSFPP SPYIINHKSR GPPRLLKSSS
101: EANVVSSSHQ KTLEEETITA ETDVKVSPRR RSTSFSFPIT EVTEDDYSNG VHARTVGNYN FDGIVDGPVG NWSPLDGKSG NGKSELDNAA NGLERVNGLS
201: EPVPIKTDKE SESEDFYDPG ESASFTSNTD VEGDAGDESS QRLATPVGEF YDAWDELSTD SGMQSSVNNI ESELSEIRLS LLMEIEKRKQ TEEALEQMQI
301: HWQRLREQMA QVGLFVPIDP TASTNNMNLS EELRCQLEIA RFVSDSLGRG MAKAEVEMEM ESMLETKNFE ITRLSDRLHY YEAVNREMSQ RNQEAIEVAR
401: RERQKRKKRQ RWIWGSIAAT ITLGSAALAW SYIPAAKPSS EVSLKDE
101: EANVVSSSHQ KTLEEETITA ETDVKVSPRR RSTSFSFPIT EVTEDDYSNG VHARTVGNYN FDGIVDGPVG NWSPLDGKSG NGKSELDNAA NGLERVNGLS
201: EPVPIKTDKE SESEDFYDPG ESASFTSNTD VEGDAGDESS QRLATPVGEF YDAWDELSTD SGMQSSVNNI ESELSEIRLS LLMEIEKRKQ TEEALEQMQI
301: HWQRLREQMA QVGLFVPIDP TASTNNMNLS EELRCQLEIA RFVSDSLGRG MAKAEVEMEM ESMLETKNFE ITRLSDRLHY YEAVNREMSQ RNQEAIEVAR
401: RERQKRKKRQ RWIWGSIAAT ITLGSAALAW SYIPAAKPSS EVSLKDE
Arabidopsis Description
AT3g50910/F18B3_190 [Source:UniProtKB/TrEMBL;Acc:Q94BX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.