Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037167.1-P | Field mustard | mitochondrion | 28.15 | 59.24 |
| CDY18608 | Canola | nucleus | 47.07 | 57.58 |
| AT3G50910.1 | Thale cress | cytosol | 56.31 | 55.93 |
| Zm00001d020667_P001 | Maize | nucleus | 14.41 | 48.12 |
| KRH08190 | Soybean | nucleus | 38.51 | 39.22 |
| VIT_04s0023g02110.t01 | Wine grape | endoplasmic reticulum | 43.02 | 38.35 |
| GSMUA_Achr6P08980_001 | Banana | nucleus | 34.46 | 37.32 |
| Solyc02g085000.2.1 | Tomato | nucleus | 38.29 | 36.8 |
| KRH76747 | Soybean | plastid | 35.59 | 36.24 |
| GSMUA_Achr2P22980_001 | Banana | cytosol, nucleus, peroxisome, plastid | 33.56 | 35.82 |
| KRH28715 | Soybean | cytosol | 32.88 | 35.61 |
| GSMUA_Achr1P12060_001 | Banana | plastid | 31.53 | 35.53 |
| PGSC0003DMT400009054 | Potato | nucleus, plastid | 37.39 | 34.51 |
| TraesCS6D01G252200.1 | Wheat | nucleus | 33.11 | 32.74 |
| OQU85551 | Sorghum | cytosol, plastid | 33.33 | 32.67 |
| TraesCS6A01G272000.1 | Wheat | nucleus | 33.11 | 32.52 |
| HORVU6Hr1G068770.1 | Barley | nucleus | 33.11 | 32.38 |
| Zm00001d051562_P001 | Maize | plastid | 31.76 | 31.97 |
| TraesCS6B01G299600.1 | Wheat | nucleus | 32.88 | 31.88 |
| OQU78405 | Sorghum | nucleus | 30.41 | 31.69 |
| Os02t0704600-01 | Rice | nucleus | 32.43 | 31.58 |
| Zm00001d017768_P006 | Maize | cytosol | 33.78 | 31.58 |
| Zm00001d038964_P001 | Maize | nucleus | 28.38 | 29.65 |
| KRH69884 | Soybean | nucleus | 37.39 | 22.93 |
Protein Annotations
| MapMan:35.2 | EntrezGene:836780 | ProteinID:AED98219.1 | ArrayExpress:AT5G66480 | EnsemblPlantsGene:AT5G66480 | RefSeq:AT5G66480 |
| TAIR:AT5G66480 | RefSeq:AT5G66480-TAIR-G | EnsemblPlants:AT5G66480.1 | TAIR:AT5G66480.1 | EMBL:AY056195 | EMBL:AY091348 |
| Unigene:At.26362 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_569035.1 |
| PO:PO:0000293 | PANTHER:PTHR35490 | UniProt:Q93ZY1 | TMHMM:TMhelix | UniParc:UPI000009F721 | SEG:seg |
Description
Bacteriophage N4 adsorption B protein [Source:UniProtKB/TrEMBL;Acc:Q93ZY1]
Coordinates
chr5:-:26544541..26547000
Molecular Weight (calculated)
49562.7 Da
IEP (calculated)
4.773
GRAVY (calculated)
-0.659
Length
444 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTFSAAALG RSLNSGTSLS SKFPSTLQSK PSILNDESKQ PKEKTFTRPQ MSPSLYATTK EIPHPNSPSS YPPSPYIINH KARGPVLFNR DSEVDGPSHP
101: ITSGEEKISG NVDVEATASL SKSTSLSFPI TEAIAVDHTN GVHTQGIHER PVWDCSPPLG TFLNEKSGRD ISNGGIGSNN ATSNLEWQSY LLEPVRIKAD
201: KELEPENFYN PGELVSFTSN TEVEDFERAE SSHSLATHVG EFYDACDELS TDSGMQSSAN NIESEVREMR LGLLMEIERR RQAEATLEQM QVHWRRLRDQ
301: LADVGMFLPL DPTRSQYSMN LADELRCQLE VTRFVSDTLG SDLAKTEVEM EMEAELEAKN FEITRLSDRL HYYETVNQEM SQRNQEAIEV ARRDGQKRKR
401: RQRWIWGSIA ATITLGSGVL AWSYLPPGML SSDEAQPQLS PKDS
101: ITSGEEKISG NVDVEATASL SKSTSLSFPI TEAIAVDHTN GVHTQGIHER PVWDCSPPLG TFLNEKSGRD ISNGGIGSNN ATSNLEWQSY LLEPVRIKAD
201: KELEPENFYN PGELVSFTSN TEVEDFERAE SSHSLATHVG EFYDACDELS TDSGMQSSAN NIESEVREMR LGLLMEIERR RQAEATLEQM QVHWRRLRDQ
301: LADVGMFLPL DPTRSQYSMN LADELRCQLE VTRFVSDTLG SDLAKTEVEM EMEAELEAKN FEITRLSDRL HYYETVNQEM SQRNQEAIEV ARRDGQKRKR
401: RQRWIWGSIA ATITLGSGVL AWSYLPPGML SSDEAQPQLS PKDS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.