Factsheet for Zm00001d003276_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d037747_P001
Zm00001d039455_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01660.1	Zm00001d037747_P001	AT3G13720.1	21798944
AT3G01660.1	Zm00001d039455_P002	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11004	Sorghum	plastid	84.89	86.45
Os04t0481300-01	Rice	mitochondrion	76.26	79.1
TraesCS2D01G338500.1	Wheat	plastid	73.74	77.07
TraesCS2B01G357700.1	Wheat	plastid	73.02	76.32
TraesCS2A01G324500.1	Wheat	plastid	72.66	75.94
GSMUA_Achr9P17960_001	Banana	mitochondrion	59.71	63.6
KRG94361	Soybean	plastid	60.43	63.16
VIT_14s0066g00160.t01	Wine grape	plastid	63.31	61.97
KRH07097	Soybean	plastid	54.32	60.4
AT3G01660.1	Thale cress	cytosol, mitochondrion	58.63	59.71
Bra040545.1-P	Field mustard	mitochondrion	52.16	56.42
CDY37508	Canola	mitochondrion	52.16	56.42
CDX77077	Canola	cytosol	51.8	56.03
Solyc02g093550.2.1	Tomato	plastid	56.12	54.55
PGSC0003DMT400032845	Potato	cytosol	56.83	54.48
Zm00001d011709_P003	Maize	plastid	31.65	25.0

Protein Annotations

EntrezGene:103646302	Gene3D:3.40.50.150	MapMan:35.2	UniProt:A0A1D6E8B5	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11
ProteinID:ONM16661.1	PFAM:PF08241	PANTHER:PTHR43036	PANTHER:PTHR43036:SF2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI000221034C	EnsemblPlantsGene:Zm00001d003276	EnsemblPlants:Zm00001d003276_P001	EnsemblPlants:Zm00001d003276_T001	SEG:seg	:

Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Coordinates

chr2:-:38563122..38565277

Molecular Weight (calculated)

31045.4 Da

IEP (calculated)

9.763

GRAVY (calculated)

-0.279

Length

278 amino acids

Sequence
(BLAST)

001: MLCTPPPPQP PLQSSRRPRP LPLRAAPRCS KPNDAEPSPS PPSTAAAGGV RRQVLSPEGR AKLDPRPDRD FYALPRLVTH VDDGFIATLT GLYRERLRAG
101: WDVLDLMSSW VSHLPPEVRF RRVVGHGLNA QELARNPRLD LFFVKDLNKE QRLELESGTF DAVLCTVSVQ YLQSPEKVFA EIFRVLKPGG VCIVSFSNRM
201: FYEKAISAWR DGTAYSRVQL VTQYFQCVEG FTQPEVIRKL PSAGGSPSSP LDAVMRLFGV AGSDPFYAVI SYRNFKPM

Best Arabidopsis Sequence Match ( AT3G01660.1 )
(BLAST)

001: MDSLRFNLQQ SPFQLKPRIL RPRITNISNR IDETDPRPSS SAGRIQRLVL NNEGRTKLNA DPDREFYSYP RFVNHVDDSF ISSLTELYRN RLRPGSTVLD
101: LMSSWVSHLP EEVKYEKVVG HGLNAQELAR NPRLDYFFVK DLNEDQKFEF EDKYFDAVLC SVGVQYLQQP EKVFAEVYRV LKPGGVLIVS FSNRMFYEKA
201: IRVWRDGTEY SRIQLVVQYF QSIEGFTQPE IIRQQPGAQI SVLTRLMGFI GLASTPDPFN AVIAYKNFKP IYE

Arabidopsis Description

At3g01660 [Source:UniProtKB/TrEMBL;Acc:Q9SS89]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.