CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES00126
OQU77594

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01660.1	EES00126	AT3G13720.1	21798944
AT3G01660.1	OQU77594	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003276_P001	Maize	plastid	86.45	84.89
Os04t0481300-01	Rice	mitochondrion	77.29	78.73
TraesCS2D01G338500.1	Wheat	plastid	76.19	78.2
TraesCS2B01G357700.1	Wheat	plastid	75.82	77.82
TraesCS2A01G324500.1	Wheat	plastid	75.46	77.44
GSMUA_Achr9P17960_001	Banana	mitochondrion	60.07	62.84
KRG94361	Soybean	plastid	61.17	62.78
VIT_14s0066g00160.t01	Wine grape	plastid	65.2	62.68
KRH07097	Soybean	plastid	54.95	60.0
Bra040545.1-P	Field mustard	mitochondrion	56.04	59.53
CDY37508	Canola	mitochondrion	56.04	59.53
AT3G01660.1	Thale cress	cytosol, mitochondrion	58.97	58.97
CDX77077	Canola	cytosol	55.31	58.75
PGSC0003DMT400032845	Potato	cytosol	58.97	55.52
Solyc02g093550.2.1	Tomato	plastid	57.14	54.55
KXG33235	Sorghum	plastid	31.5	25.0

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.2	EntrezGene:8058730	UniProt:C5YAS9	EnsemblPlants:EES11004	ProteinID:EES11004
ProteinID:EES11004.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11	PFAM:PF08241	PANTHER:PTHR43036	PANTHER:PTHR43036:SF2
InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3006G122500	SUPFAM:SSF53335	unigene:Sbi.1869	UniParc:UPI0001A86F83	RefSeq:XP_002446676.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:48857920..48859019

Molecular Weight (calculated)

30551.6 Da

IEP (calculated)

9.375

GRAVY (calculated)

-0.272

Length

273 amino acids

Sequence
(BLAST)

001: MLCTPPQPLQ HSSRSRRPLR AAPAPRCSND AQPSPSTASG AGGVRRLVLS PEGRAKLDPR PDRDFYAFPR LVTHVDDGFI ATLTDLYRDR LRAGWDVLDL
101: MSSWVSHLPP EVQFRRVVGH GLNAQELARN PRLDYFFVKD LNKEQQLELQ SGTFDAVLCT VSVQYLQSPE KVFAEMFRVL KPGGVCIVSF SNRMFYEKAV
201: SAWRDGTAYS RVQLVTQYFQ CVEGFTQPEV IRKLPSAGGS SPSSPLDAVM RLFGVAGSDP FYAVISYRNF KPM

Best Arabidopsis Sequence Match ( AT3G01660.1 )
(BLAST)

001: MDSLRFNLQQ SPFQLKPRIL RPRITNISNR IDETDPRPSS SAGRIQRLVL NNEGRTKLNA DPDREFYSYP RFVNHVDDSF ISSLTELYRN RLRPGSTVLD
101: LMSSWVSHLP EEVKYEKVVG HGLNAQELAR NPRLDYFFVK DLNEDQKFEF EDKYFDAVLC SVGVQYLQQP EKVFAEVYRV LKPGGVLIVS FSNRMFYEKA
201: IRVWRDGTEY SRIQLVVQYF QSIEGFTQPE IIRQQPGAQI SVLTRLMGFI GLASTPDPFN AVIAYKNFKP IYE

Arabidopsis Description

At3g01660 [Source:UniProtKB/TrEMBL;Acc:Q9SS89]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.