Factsheet for PGSC0003DMT400032845

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 5
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400006409

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01660.1	PGSC0003DMT400006409	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g093550.2.1	Tomato	plastid	90.34	91.61
KRG94361	Soybean	plastid	63.1	68.8
VIT_14s0066g00160.t01	Wine grape	plastid	66.9	68.31
GSMUA_Achr9P17960_001	Banana	mitochondrion	60.0	66.67
KRH07097	Soybean	plastid	56.21	65.2
AT3G01660.1	Thale cress	cytosol, mitochondrion	56.9	60.44
TraesCS2D01G338500.1	Wheat	plastid	54.48	59.4
TraesCS2A01G324500.1	Wheat	plastid	54.14	59.02
TraesCS2B01G357700.1	Wheat	plastid	54.14	59.02
EES11004	Sorghum	plastid	55.52	58.97
Os04t0481300-01	Rice	mitochondrion	54.48	58.96
Bra040545.1-P	Field mustard	mitochondrion	51.72	58.37
CDY37508	Canola	mitochondrion	51.72	58.37
CDX77077	Canola	cytosol	51.38	57.98
Zm00001d003276_P001	Maize	plastid	54.48	56.83
PGSC0003DMT400008450	Potato	mitochondrion, plastid	29.66	27.22

Protein Annotations

EnsemblPlants:PGSC0003DMT400032845	EnsemblPlantsGene:PGSC0003DMG400012615	EntrezGene:102583120	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11
InterPro:SAM-dependent_MTases	PANTHER:PTHR43036	PANTHER:PTHR43036:SF2	PFAM:PF08241	PGSC:PGSC0003DMG400012615	RefSeq:XP_006338799.1
SUPFAM:SSF53335	UniParc:UPI000294C7CB	UniProt:M1AY65	MapMan:35.2	:	:

Description

Methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400012615]

Coordinates

chr2:+:47570083..47571508

Molecular Weight (calculated)

33532.4 Da

IEP (calculated)

9.489

GRAVY (calculated)

-0.344

Length

290 amino acids

Sequence
(BLAST)

001: MFLTIAPNSH PKTWESSNLH LFPLPSKLKT QPSIIIPKAY YKNEDNNNST KSTAGKIKRM VLTQQGRTKL NILPDREFYA FPRFVTHVDD RFISNLTNLY
101: RKCLRPEFEI LDLMSSWVSH LPQEVKYKKV VGHGLNAQEL AKNPKLDYFF VKDLNEDEKL QFENCSFDAV LCTVSVQYLQ QPEKVFAEVF RILRPGGVFI
201: VSFSNRLFYD KAISAWRDSS GYGRVQLVVQ YFQCIKGFTE PEVIRKLPSN DDQENKSPLS KIMQLIGLLS ASSDPFYAVI AYRNFKPVHE

Best Arabidopsis Sequence Match ( AT3G01660.1 )
(BLAST)

001: MDSLRFNLQQ SPFQLKPRIL RPRITNISNR IDETDPRPSS SAGRIQRLVL NNEGRTKLNA DPDREFYSYP RFVNHVDDSF ISSLTELYRN RLRPGSTVLD
101: LMSSWVSHLP EEVKYEKVVG HGLNAQELAR NPRLDYFFVK DLNEDQKFEF EDKYFDAVLC SVGVQYLQQP EKVFAEVYRV LKPGGVLIVS FSNRMFYEKA
201: IRVWRDGTEY SRIQLVVQYF QSIEGFTQPE IIRQQPGAQI SVLTRLMGFI GLASTPDPFN AVIAYKNFKP IYE

Arabidopsis Description

At3g01660 [Source:UniProtKB/TrEMBL;Acc:Q9SS89]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.