Factsheet for PGSC0003DMT400008450

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g025520.2.1	Tomato	cytosol, plastid	68.67	93.53
CDY47761	Canola	cytosol	33.23	85.37
Os01t0712600-00	Rice	cytosol	60.44	77.33
KRH49054	Soybean	mitochondrion, plastid	69.94	73.42
VIT_11s0016g02350.t01	Wine grape	plastid	71.52	71.75
CDY54271	Canola	plastid	69.3	71.1
CDY30212	Canola	plastid	68.99	70.78
Bra024142.1-P	Field mustard	plastid	68.35	70.13
HORVU1Hr1G026880.1	Barley	cytosol, nucleus	18.35	69.88
KRH74154	Soybean	mitochondrion	56.01	68.6
HORVU7Hr1G052230.3	Barley	cytosol	34.49	68.55
TraesCS3B01G278300.1	Wheat	mitochondrion	64.87	66.78
AT4G29590.1	Thale cress	plastid	66.14	65.93
GSMUA_Achr7P24050_001	Banana	plastid	64.87	65.71
HORVU5Hr1G055210.2	Barley	cytosol	33.23	65.22
TraesCS3A01G249400.2	Wheat	mitochondrion	63.29	65.15
TraesCS3D01G249400.1	Wheat	mitochondrion	62.97	64.82
HORVU6Hr1G044380.2	Barley	mitochondrion	34.18	63.91
KXG33235	Sorghum	plastid	63.92	58.72
Zm00001d011709_P003	Maize	plastid	62.03	55.68
HORVU3Hr1G067300.1	Barley	plastid	63.61	52.07
PGSC0003DMT400032845	Potato	cytosol	27.22	29.66

Protein Annotations

EntrezGene:102599007	Gene3D:3.40.50.150	MapMan:35.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009507	GO:GO:0009536	GO:GO:0016740	GO:GO:0032259	UniProt:M0ZUK9	InterPro:Methyltransf_11
PFAM:PF08241	EnsemblPlantsGene:PGSC0003DMG400003266	PGSC:PGSC0003DMG400003266	EnsemblPlants:PGSC0003DMT400008450	PANTHER:PTHR43036	PANTHER:PTHR43036:SF1
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0002953DE5	RefSeq:XP_006361827.1	SEG:seg	:

Description

Methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400003266]

Coordinates

chr7:-:33335809..33344700

Molecular Weight (calculated)

35326.4 Da

IEP (calculated)

8.552

GRAVY (calculated)

-0.157

Length

316 amino acids

Sequence
(BLAST)

001: MANRFGVKLQ SRLPNLAGIY PFSTPITCTN SVQCCSKAQT RIVGKRRAIR CRNIHRRVVL GIGVSLLSQF MSMAGNVGAK SFVASARQKG AIEQVLKNVE
101: WPEQFPFKDE DFQRFDESSD TLFYEMPRFV THIDDQAIAA LTKYYSEVLP SSNTPGVAVL DMCSSWVSHY PAGFKQERIV GMGMNEEELK RNTVLTEYVV
201: QDLNNNPKLP FGDNTFDVIT NVVSVDYLTK PLDVFKEMSR VLKPGGLAIM SFSNRCFWTK AISIWTSTGD ADHVMIVGSY FHYAGGFEPP QAVDISPNPG
301: RSDPLYIVYS RKIATA

Best Arabidopsis Sequence Match ( AT4G29590.1 )
(BLAST)

001: MSKTANFLSL RSNPLPPIFS STGNSPFLRA SSALNLPTTA SKPFHSWIRA SSRRRLVLGG FGGASLWMNN NMSGKFGGKS FIASARQTNP SPVEQALNKV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SU88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.