Factsheet for TraesCS3B01G278300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G249400.1	Wheat	mitochondrion	91.53	91.53
TraesCS3A01G249400.2	Wheat	mitochondrion	91.21	91.21
Os01t0712600-00	Rice	cytosol	71.66	89.07
HORVU1Hr1G026880.1	Barley	cytosol, nucleus	22.15	81.93
CDY47761	Canola	cytosol	32.25	80.49
Solyc07g025520.2.1	Tomato	cytosol, plastid	58.31	77.16
HORVU7Hr1G052230.3	Barley	cytosol	38.76	74.84
HORVU5Hr1G055210.2	Barley	cytosol	38.11	72.67
HORVU3Hr1G067300.1	Barley	plastid	90.88	72.28
HORVU6Hr1G044380.2	Barley	mitochondrion	38.44	69.82
KXG33235	Sorghum	plastid	78.18	69.77
GSMUA_Achr7P24050_001	Banana	plastid	70.68	69.55
Zm00001d011709_P003	Maize	plastid	76.87	67.05
KRH49054	Soybean	mitochondrion, plastid	64.82	66.11
KRH74154	Soybean	mitochondrion	54.72	65.12
PGSC0003DMT400008450	Potato	mitochondrion, plastid	66.78	64.87
VIT_11s0016g02350.t01	Wine grape	plastid	66.45	64.76
CDY30212	Canola	plastid	64.5	64.29
CDY54271	Canola	plastid	64.17	63.96
Bra024142.1-P	Field mustard	plastid	63.19	62.99
AT4G29590.1	Thale cress	plastid	62.22	60.25
TraesCS2B01G357700.1	Wheat	plastid	27.36	31.58

Protein Annotations

EnsemblPlants:TraesCS3B01G278300.1	EnsemblPlantsGene:TraesCS3B01G278300	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009507	GO:GO:0009536	GO:GO:0016740	InterPro:Methyltransf_11	InterPro:SAM-dependent_MTases	PANTHER:PTHR43036
PANTHER:PTHR43036:SF1	PFAM:PF08241	SEG:seg	SUPFAM:SSF53335	MapMan:35.2	:

Description

No Description!

Coordinates

chr3B:+:448565294..448574536

Molecular Weight (calculated)

34171.9 Da

IEP (calculated)

9.019

GRAVY (calculated)

-0.222

Length

307 amino acids

Sequence
(BLAST)

001: MATLAPRPDL LLVALRRSRA RTLRARAAAV PRARRAPVPP QAARRVFLGL GAAFVDQLAR MASGGTPSRS FVAAARPRQG VSPVEQILKN VEWPDEFPFK
101: PDDFSRFDES SDTVFYSAPR FVTHIDDPAI RALTKYYSQV LPPSNTPGVA ILDMCSSWVS HYPVGYQQEK IVGMGMNEDE LKKNPVLTEY VVQDLNLNPK
201: LPFDDNTFDV ITNVVSVDYL TKPTDVFKEM RRILKPSGLA IMSFSNRCFW TKAISIWTST GDADHAWIVG AYFHYAGGFE PPEAVDISPN PGQTDPMYIV
301: CSRKKTA

Best Arabidopsis Sequence Match ( AT4G29590.1 )
(BLAST)

001: MSKTANFLSL RSNPLPPIFS STGNSPFLRA SSALNLPTTA SKPFHSWIRA SSRRRLVLGG FGGASLWMNN NMSGKFGGKS FIASARQTNP SPVEQALNKV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SU88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.