Factsheet for Solyc07g025520.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47761	Canola	cytosol	44.83	84.55
Os01t0712600-00	Rice	cytosol	77.59	72.87
HORVU1Hr1G026880.1	Barley	cytosol, nucleus	25.0	69.88
PGSC0003DMT400008450	Potato	mitochondrion, plastid	93.53	68.67
HORVU7Hr1G052230.3	Barley	cytosol	46.55	67.92
KRH74154	Soybean	mitochondrion	73.71	66.28
HORVU5Hr1G055210.2	Barley	cytosol	44.83	64.6
HORVU6Hr1G044380.2	Barley	mitochondrion	46.12	63.31
KRH49054	Soybean	mitochondrion, plastid	81.47	62.79
VIT_11s0016g02350.t01	Wine grape	plastid	81.9	60.32
Bra024142.1-P	Field mustard	plastid	79.74	60.06
CDY54271	Canola	plastid	79.74	60.06
CDY30212	Canola	plastid	79.74	60.06
TraesCS3A01G249400.2	Wheat	mitochondrion	77.59	58.63
TraesCS3B01G278300.1	Wheat	mitochondrion	77.16	58.31
TraesCS3D01G249400.1	Wheat	mitochondrion	77.16	58.31
GSMUA_Achr7P24050_001	Banana	plastid	76.72	57.05
AT4G29590.1	Thale cress	plastid	77.59	56.78
KXG33235	Sorghum	plastid	76.72	51.74
Zm00001d011709_P003	Maize	plastid	75.0	49.43
HORVU3Hr1G067300.1	Barley	plastid	77.59	46.63
Solyc02g093550.2.1	Tomato	plastid	35.34	28.67

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.2	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009507	GO:GO:0009536	GO:GO:0016740	GO:GO:0032259	UniProt:K4CD97	InterPro:Methyltransf_11
PFAM:PF08241	PANTHER:PTHR43036	PANTHER:PTHR43036:SF1	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:Solyc07g025520.2
EnsemblPlants:Solyc07g025520.2.1	UniParc:UPI000276AE16	:	:	:	:

Description

No Description!

Coordinates

chr7:-:28770990..28778367

Molecular Weight (calculated)

26483.4 Da

IEP (calculated)

4.801

GRAVY (calculated)

-0.171

Length

232 amino acids

Sequence
(BLAST)

001: MHCFYFLFLK VLKNVEWPEQ FPFKDEDFQR FDESSDTLFY EMPRFVTHID DQAIAALTKY YSEVLPSSNT PGVAVLDMCS SWVSHYPAGF KQERIVGMGM
101: NEEELKRNAV LTEYVVQDLN DNPKLPFGDN TFDVITNVVS VDYLTKPLDV FKEMSRVLKH GGLAIMSFSN RCFWTKAISI WTSTGDADHV MIVGSYFHYA
201: GGFEPPQAVD ISPNTGRSDP MYIVYSRKIA TA

Best Arabidopsis Sequence Match ( AT4G29590.1 )
(BLAST)

001: MSKTANFLSL RSNPLPPIFS STGNSPFLRA SSALNLPTTA SKPFHSWIRA SSRRRLVLGG FGGASLWMNN NMSGKFGGKS FIASARQTNP SPVEQALNKV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SU88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.