CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G044380.2	Barley	mitochondrion	63.41	46.15
Solyc07g025520.2.1	Tomato	cytosol, plastid	84.55	44.83
KRH74154	Soybean	mitochondrion	88.62	42.25
Os01t0712600-00	Rice	cytosol	81.3	40.49
CDY30212	Canola	plastid	96.75	38.64
CDY54271	Canola	plastid	96.75	38.64
AT4G29590.1	Thale cress	plastid	94.31	36.59
KRH49054	Soybean	mitochondrion, plastid	86.99	35.55
VIT_11s0016g02350.t01	Wine grape	plastid	89.43	34.92
GSMUA_Achr7P24050_001	Banana	plastid	86.18	33.97
PGSC0003DMT400008450	Potato	mitochondrion, plastid	85.37	33.23
TraesCS3B01G278300.1	Wheat	mitochondrion	80.49	32.25
TraesCS3D01G249400.1	Wheat	mitochondrion	80.49	32.25
TraesCS3A01G249400.2	Wheat	mitochondrion	79.67	31.92
HORVU5Hr1G055210.2	Barley	cytosol	38.21	29.19
KXG33235	Sorghum	plastid	81.3	29.07
HORVU7Hr1G052230.3	Barley	cytosol	35.77	27.67
Zm00001d011709_P003	Maize	plastid	74.8	26.14
HORVU3Hr1G067300.1	Barley	plastid	80.49	25.65
CDY37508	Canola	mitochondrion	34.96	16.73
CDX77077	Canola	cytosol	34.15	16.34
HORVU1Hr1G026880.1	Barley	cytosol, nucleus	1.63	2.41

Protein Annotations

EnsemblPlants:CDY47761	EnsemblPlantsGene:GSBRNA2T00088056001	Gene3D:3.40.50.150	GO:A0A078ID10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11
InterPro:SAM-dependent_MTases	PANTHER:PTHR43036	PANTHER:PTHR43036:SF1	PFAM:PF08241	ProteinID:CDY47761	ProteinID:CDY47761.1
SUPFAM:SSF53335	UniParc:UPI0004EEF838	UniProt:A0A078ID10	MapMan:35.2	:	:

Description

BnaC07g41990DBnaC07g41990D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078ID10]

Coordinates

chrLK032734:+:351..988

Molecular Weight (calculated)

13748.5 Da

IEP (calculated)

5.666

GRAVY (calculated)

-0.008

Length

123 amino acids

Sequence
(BLAST)

001: VLTEYIVQDL NINPKLPFED NSFQVITNVV SVDYLTKPLE VFKEMNRILK PGGLALMSFS NRCFFTKAIS IWTSTGDADH ALIVGSYFHY AGGYEPPQAV
101: DISPNPGRSD PMYVVYSRKL PVA

Best Arabidopsis Sequence Match ( AT4G29590.1 )
(BLAST)

001: MSKTANFLSL RSNPLPPIFS STGNSPFLRA SSALNLPTTA SKPFHSWIRA SSRRRLVLGG FGGASLWMNN NMSGKFGGKS FIASARQTNP SPVEQALNKV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SU88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.