Factsheet for TraesCS3A01G249400.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G249400.1	Wheat	mitochondrion	96.74	96.74
TraesCS3B01G278300.1	Wheat	mitochondrion	91.21	91.21
Os01t0712600-00	Rice	cytosol	71.01	88.26
HORVU1Hr1G026880.1	Barley	cytosol, nucleus	22.15	81.93
CDY47761	Canola	cytosol	31.92	79.67
Solyc07g025520.2.1	Tomato	cytosol, plastid	58.63	77.59
HORVU3Hr1G067300.1	Barley	plastid	96.09	76.42
HORVU7Hr1G052230.3	Barley	cytosol	39.41	76.1
HORVU5Hr1G055210.2	Barley	cytosol	38.44	73.29
GSMUA_Achr7P24050_001	Banana	plastid	71.99	70.83
HORVU6Hr1G044380.2	Barley	mitochondrion	38.76	70.41
KXG33235	Sorghum	plastid	77.52	69.19
Zm00001d011709_P003	Maize	plastid	78.18	68.18
KRH49054	Soybean	mitochondrion, plastid	64.17	65.45
KRH74154	Soybean	mitochondrion	54.72	65.12
CDY30212	Canola	plastid	63.52	63.31
PGSC0003DMT400008450	Potato	mitochondrion, plastid	65.15	63.29
VIT_11s0016g02350.t01	Wine grape	plastid	64.82	63.17
CDY54271	Canola	plastid	63.19	62.99
Bra024142.1-P	Field mustard	plastid	62.54	62.34
AT4G29590.1	Thale cress	plastid	60.91	58.99
TraesCS2A01G324500.1	Wheat	plastid	28.34	32.71

Protein Annotations

EnsemblPlants:TraesCS3A01G249400.2	EnsemblPlantsGene:TraesCS3A01G249400	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009507	GO:GO:0009536	GO:GO:0016740	InterPro:Methyltransf_11	InterPro:SAM-dependent_MTases	PANTHER:PTHR43036
PANTHER:PTHR43036:SF1	PFAM:PF08241	SEG:seg	SUPFAM:SSF53335	MapMan:35.2	:

Description

No Description!

Coordinates

chr3A:+:467863253..467872120

Molecular Weight (calculated)

34184.0 Da

IEP (calculated)

9.226

GRAVY (calculated)

-0.230

Length

307 amino acids

Sequence
(BLAST)

001: MATLAPRPDL LLVALRRSRA RTLRVRAAAV PRARRPPVPP QAARRVFLGL GAAFVDQLAR MASGGAPSRS FVAAARPRQG VSPVEEILKN VEWPDEFPFK
101: PDDFGRFDES SDTVFYSAPR FVTHIDDPAI RALTKYYSQV LPPSNTPGVA ILDMCSSWVS HYPAGYKQEK IVGMGMNENE LKKNPVLTEY VVQDLNLNPK
201: LPFDDNTFDV ITNVVSVDYL TKPMDVFKEM RRILKPSGLA IMSFSNRCFW TKAISIWTST GDADHAWIVG AYYHYAGGFE PPEAVDISPN PGQTDPMYIV
301: CSRKKTA

Best Arabidopsis Sequence Match ( AT4G29590.1 )
(BLAST)

001: MSKTANFLSL RSNPLPPIFS STGNSPFLRA SSALNLPTTA SKPFHSWIRA SSRRRLVLGG FGGASLWMNN NMSGKFGGKS FIASARQTNP SPVEQALNKV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SU88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.