Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G052230.3 | Barley | cytosol | 78.31 | 40.88 |
| HORVU5Hr1G055210.2 | Barley | cytosol | 77.11 | 39.75 |
| Os01t0712600-00 | Rice | cytosol | 78.31 | 26.32 |
| Solyc07g025520.2.1 | Tomato | cytosol, plastid | 69.88 | 25.0 |
| TraesCS3D01G249400.1 | Wheat | mitochondrion | 81.93 | 22.15 |
| TraesCS3B01G278300.1 | Wheat | mitochondrion | 81.93 | 22.15 |
| TraesCS3A01G249400.2 | Wheat | mitochondrion | 81.93 | 22.15 |
| Bra024142.1-P | Field mustard | plastid | 69.88 | 18.83 |
| CDY30212 | Canola | plastid | 69.88 | 18.83 |
| CDY54271 | Canola | plastid | 69.88 | 18.83 |
| HORVU3Hr1G067300.1 | Barley | plastid | 86.75 | 18.65 |
| KXG33235 | Sorghum | plastid | 77.11 | 18.6 |
| Zm00001d011709_P003 | Maize | plastid | 78.31 | 18.47 |
| PGSC0003DMT400008450 | Potato | mitochondrion, plastid | 69.88 | 18.35 |
| KRH49054 | Soybean | mitochondrion, plastid | 66.27 | 18.27 |
| AT4G29590.1 | Thale cress | plastid | 68.67 | 17.98 |
| VIT_11s0016g02350.t01 | Wine grape | plastid | 66.27 | 17.46 |
| GSMUA_Achr7P24050_001 | Banana | plastid | 65.06 | 17.31 |
| HORVU6Hr1G044380.2 | Barley | mitochondrion | 31.33 | 15.38 |
| KRH74154 | Soybean | mitochondrion | 42.17 | 13.57 |
| CDY47761 | Canola | cytosol | 2.41 | 1.63 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G026880.1 | EnsemblPlantsGene:HORVU1Hr1G026880 | PANTHER:PTHR43036 | PANTHER:PTHR43036:SF1 | UniParc:UPI000B47D62A | UniProt:A0A287EZI5 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:139055284..139055895
Molecular Weight (calculated)
9350.1 Da
IEP (calculated)
6.787
GRAVY (calculated)
-0.580
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: STSSDTELYS PPRFVTHIDD QAMRALTKYY SQALPPSKTH GVAILDMCSS WVSHYPTGYK QEKIVGMGMN EDELKKNPVP LPY
001: MALDTYASSN PNDVHEDVLL KARDACYKAR DAFYACLEKE SGKKPTEIAT VGLLYPKECS NSRTQFVNNC RSSWVKHFDR EYCRNKRVQR LLDDGDERKG
101: PMSLPQPYTF KPSPST
101: PMSLPQPYTF KPSPST
Arabidopsis Description
AT5G58005 protein [Source:UniProtKB/TrEMBL;Acc:Q8RXH9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.