Factsheet for Bra024142.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30212	Canola	plastid	97.73	97.73
AT4G29590.1	Thale cress	plastid	87.66	85.17
Solyc07g025520.2.1	Tomato	cytosol, plastid	60.06	79.74
Os01t0712600-00	Rice	cytosol	60.39	75.3
KRH49054	Soybean	mitochondrion, plastid	70.13	71.76
HORVU1Hr1G026880.1	Barley	cytosol, nucleus	18.83	69.88
VIT_11s0016g02350.t01	Wine grape	plastid	71.1	69.52
PGSC0003DMT400008450	Potato	mitochondrion, plastid	70.13	68.35
KRH74154	Soybean	mitochondrion	55.84	66.67
HORVU7Hr1G052230.3	Barley	cytosol	33.77	65.41
GSMUA_Achr7P24050_001	Banana	plastid	65.26	64.42
TraesCS3B01G278300.1	Wheat	mitochondrion	62.99	63.19
HORVU5Hr1G055210.2	Barley	cytosol	32.79	62.73
TraesCS3A01G249400.2	Wheat	mitochondrion	62.34	62.54
TraesCS3D01G249400.1	Wheat	mitochondrion	62.34	62.54
HORVU6Hr1G044380.2	Barley	mitochondrion	33.44	60.95
KXG33235	Sorghum	plastid	62.34	55.81
Zm00001d011709_P003	Maize	plastid	61.04	53.41
HORVU3Hr1G067300.1	Barley	plastid	63.31	50.52
Bra040545.1-P	Field mustard	mitochondrion	24.03	28.79

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.2	EnsemblPlantsGene:Bra024142	EnsemblPlants:Bra024142.1	EnsemblPlants:Bra024142.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009507	GO:GO:0009536	GO:GO:0016740	GO:GO:0032259
UniProt:M4E5T8	InterPro:Methyltransf_11	PFAM:PF08241	PANTHER:PTHR43036	PANTHER:PTHR43036:SF1	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	UniParc:UPI0002540CC8	:	:	:	:

Description

AT4G29590 (E=7e-150) | methyltransferase

Coordinates

chrA03:-:27343452..27345348

Molecular Weight (calculated)

34481.1 Da

IEP (calculated)

6.937

GRAVY (calculated)

-0.226

Length

308 amino acids

Sequence
(BLAST)

001: MSKTCNFLGL RVRSNPPLPF SNSSALNLLT AASRPFDRWI RASSRRRLVL GGFAGTFLWM NNMSGNIGGK AFIASARQTN PSPVEQALSK VEWPENFPFK
101: EEDFQRFDES SDSTFYEAPR FVTHIDDPAI AALTKYYSKV LPESETPGVS ILDMCSSWVS HYPAGYKQER IVGMGMNEEE LKRNPVLTEY IVQDLNVDPK
201: LPFEDNSFQV ITNVVSVDYL TKPLVVFKEM NRILKPGGLA LMSFSNRCFF TKAISIWTST GDADHALIVG SYFHYAGGYE PPQAVDISPN PGRSDPMYVV
301: FSRKLPVA

Best Arabidopsis Sequence Match ( AT4G29590.1 )
(BLAST)

001: MSKTANFLSL RSNPLPPIFS STGNSPFLRA SSALNLPTTA SKPFHSWIRA SSRRRLVLGG FGGASLWMNN NMSGKFGGKS FIASARQTNP SPVEQALNKV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SU88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.