CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 2
plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, vacuole
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47761	Canola	cytosol	42.25	88.62
Solyc07g025520.2.1	Tomato	cytosol, plastid	66.28	73.71
Os01t0712600-00	Rice	cytosol	62.79	65.59
KRH49054	Soybean	mitochondrion, plastid	75.97	65.12
VIT_11s0016g02350.t01	Wine grape	plastid	74.03	60.63
CDY30212	Canola	plastid	67.05	56.17
CDY54271	Canola	plastid	67.05	56.17
PGSC0003DMT400008450	Potato	mitochondrion, plastid	68.6	56.01
Bra024142.1-P	Field mustard	plastid	66.67	55.84
TraesCS3A01G249400.2	Wheat	mitochondrion	65.12	54.72
TraesCS3B01G278300.1	Wheat	mitochondrion	65.12	54.72
TraesCS3D01G249400.1	Wheat	mitochondrion	65.12	54.72
AT4G29590.1	Thale cress	plastid	65.89	53.63
GSMUA_Achr7P24050_001	Banana	plastid	64.34	53.21
HORVU5Hr1G055210.2	Barley	cytosol	32.95	52.8
HORVU7Hr1G052230.3	Barley	cytosol	32.17	52.2
HORVU6Hr1G044380.2	Barley	mitochondrion	34.11	52.07
KXG33235	Sorghum	plastid	63.57	47.67
Zm00001d011709_P003	Maize	plastid	61.63	45.17
HORVU3Hr1G067300.1	Barley	plastid	63.57	42.49
HORVU1Hr1G026880.1	Barley	cytosol, nucleus	13.57	42.17
KRH07097	Soybean	plastid	27.13	28.0
KRG94361	Soybean	plastid	28.68	27.82

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.2	UniProt:A0A0R0L4J8	EMBL:ACUP02000007	EnsemblPlantsGene:GLYMA_01G002900	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259
EnsemblPlants:KRH74154	ProteinID:KRH74154	ProteinID:KRH74154.1	InterPro:Methyltransf_11	PFAM:PF08241	PANTHER:PTHR43036
PANTHER:PTHR43036:SF1	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0006EDE02B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:346352..349873

Molecular Weight (calculated)

28935.7 Da

IEP (calculated)

6.670

GRAVY (calculated)

-0.127

Length

258 amino acids

Sequence
(BLAST)

001: MTNFVGLRLH TRLSLPLPLP VLGGASHSCS ATATTLSRAV IRKWNWGIKG PRRMIKGGPS VDEILKNVEW PEQFPFKEEE FQRFDETPDS LFYEAPRFVT
101: HIDDPAIAAL TKYYSKVFPP SNTPGVSILD MCSSWVLTEY AVQDLNVNPK LPFEDNSFDL ITNVVSVDYL TKPLDVFKEM CRILKPGGLA IMSFSNRCFW
201: TKAISIWTST GDADHVMIVG SYFHYAGGFE PPQAVDISPN PGRSDPMYIV YSRKLSTA

Best Arabidopsis Sequence Match ( AT4G29590.1 )
(BLAST)

001: MSKTANFLSL RSNPLPPIFS STGNSPFLRA SSALNLPTTA SKPFHSWIRA SSRRRLVLGG FGGASLWMNN NMSGKFGGKS FIASARQTNP SPVEQALNKV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SU88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.