CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30212	Canola	plastid	97.73	97.73
CDY47761	Canola	cytosol	38.64	96.75
AT4G29590.1	Thale cress	plastid	88.96	86.44
Solyc07g025520.2.1	Tomato	cytosol, plastid	60.06	79.74
Os01t0712600-00	Rice	cytosol	60.71	75.71
KRH49054	Soybean	mitochondrion, plastid	71.1	72.76
VIT_11s0016g02350.t01	Wine grape	plastid	71.75	70.16
HORVU1Hr1G026880.1	Barley	cytosol, nucleus	18.83	69.88
PGSC0003DMT400008450	Potato	mitochondrion, plastid	71.1	69.3
KRH74154	Soybean	mitochondrion	56.17	67.05
GSMUA_Achr7P24050_001	Banana	plastid	65.91	65.06
HORVU7Hr1G052230.3	Barley	cytosol	33.44	64.78
TraesCS3B01G278300.1	Wheat	mitochondrion	63.96	64.17
TraesCS3D01G249400.1	Wheat	mitochondrion	62.99	63.19
TraesCS3A01G249400.2	Wheat	mitochondrion	62.99	63.19
HORVU5Hr1G055210.2	Barley	cytosol	32.47	62.11
HORVU6Hr1G044380.2	Barley	mitochondrion	33.77	61.54
KXG33235	Sorghum	plastid	62.99	56.4
Zm00001d011709_P003	Maize	plastid	61.69	53.98
HORVU3Hr1G067300.1	Barley	plastid	63.96	51.04
CDY37508	Canola	mitochondrion	23.7	28.4
CDX77077	Canola	cytosol	23.05	27.63

Protein Annotations

EnsemblPlants:CDY54271	EnsemblPlantsGene:GSBRNA2T00013748001	Gene3D:3.40.50.150	GO:A0A078IW86	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11
InterPro:SAM-dependent_MTases	PANTHER:PTHR43036	PANTHER:PTHR43036:SF1	PFAM:PF08241	ProteinID:CDY54271	ProteinID:CDY54271.1
SUPFAM:SSF53335	UniParc:UPI0004EE7AC3	UniProt:A0A078IW86	MapMan:35.2	:	:

Description

BnaC07g50730DBnaC07g50730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IW86]

Coordinates

chrLK033298:-:6459..8578

Molecular Weight (calculated)

34466.9 Da

IEP (calculated)

6.525

GRAVY (calculated)

-0.252

Length

308 amino acids

Sequence
(BLAST)

001: MSKTCNFLGL RLRSNPPLPF SNSSALNLLT AASRPFDRWI RASSRRRLVL GGFAGASLWM NNMSGNIGSK SFIASARQTN PSPVEQALSK VEWPENFPFK
101: EEDFQRFDES SDSTFYEAPR FVTHIDDPAI AALTKYYSKV LPESETPGVS ILDMCSSWVS HYPAGYKQER IVGMGMNEEE LKRNPVLTEY IVQDLNVDPN
201: LPFEDNSFQV ITNVVSVDYL TKPLIVFKEM NRILKPGGLA LMSFSNRCFF TKAISIWTST GDADHALIVG SYFHYAGGYE PPQAVDISPN PGRSDPMYVV
301: YSRKLPVA

Best Arabidopsis Sequence Match ( AT4G29590.1 )
(BLAST)

001: MSKTANFLSL RSNPLPPIFS STGNSPFLRA SSALNLPTTA SKPFHSWIRA SSRRRLVLGG FGGASLWMNN NMSGKFGGKS FIASARQTNP SPVEQALNKV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SU88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.