Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47761 | Canola | cytosol | 36.59 | 94.31 |
| CDY54271 | Canola | plastid | 86.44 | 88.96 |
| CDY30212 | Canola | plastid | 85.8 | 88.31 |
| Bra024142.1-P | Field mustard | plastid | 85.17 | 87.66 |
| Solyc07g025520.2.1 | Tomato | cytosol, plastid | 56.78 | 77.59 |
| Os01t0712600-00 | Rice | cytosol | 57.41 | 73.68 |
| KRH49054 | Soybean | mitochondrion, plastid | 66.56 | 70.1 |
| VIT_11s0016g02350.t01 | Wine grape | plastid | 68.45 | 68.89 |
| HORVU1Hr1G026880.1 | Barley | cytosol, nucleus | 17.98 | 68.67 |
| PGSC0003DMT400008450 | Potato | mitochondrion, plastid | 65.93 | 66.14 |
| KRH74154 | Soybean | mitochondrion | 53.63 | 65.89 |
| GSMUA_Achr7P24050_001 | Banana | plastid | 63.72 | 64.74 |
| HORVU7Hr1G052230.3 | Barley | cytosol | 31.86 | 63.52 |
| TraesCS3B01G278300.1 | Wheat | mitochondrion | 60.25 | 62.22 |
| HORVU5Hr1G055210.2 | Barley | cytosol | 31.55 | 62.11 |
| HORVU6Hr1G044380.2 | Barley | mitochondrion | 32.49 | 60.95 |
| TraesCS3A01G249400.2 | Wheat | mitochondrion | 58.99 | 60.91 |
| TraesCS3D01G249400.1 | Wheat | mitochondrion | 58.99 | 60.91 |
| KXG33235 | Sorghum | plastid | 59.94 | 55.23 |
| Zm00001d011709_P003 | Maize | plastid | 59.31 | 53.41 |
| HORVU3Hr1G067300.1 | Barley | plastid | 59.94 | 49.22 |
| AT3G01660.1 | Thale cress | cytosol, mitochondrion | 25.55 | 29.67 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.2 | EntrezGene:829080 | UniProt:A0A178UTX2 | ProteinID:AEE85649.1 | ArrayExpress:AT4G29590 |
| EnsemblPlantsGene:AT4G29590 | RefSeq:AT4G29590 | TAIR:AT4G29590 | RefSeq:AT4G29590-TAIR-G | EnsemblPlants:AT4G29590.1 | TAIR:AT4G29590.1 |
| ProteinID:CAB45319.1 | ProteinID:CAB79717.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0016740 | GO:GO:0032259 | InterPro:Methyltransf_11 | RefSeq:NP_194688.1 | ProteinID:OAO97065.1 |
| PFAM:PF08241 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43036 | PANTHER:PTHR43036:SF1 | UniProt:Q9SU88 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | UniParc:UPI00000A92C8 | : | : | : | : |
Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SU88]
Coordinates
chr4:-:14511962..14514588
Molecular Weight (calculated)
35374.9 Da
IEP (calculated)
7.609
GRAVY (calculated)
-0.292
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKTANFLSL RSNPLPPIFS STGNSPFLRA SSALNLPTTA SKPFHSWIRA SSRRRLVLGG FGGASLWMNN NMSGKFGGKS FIASARQTNP SPVEQALNKV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.