Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77077 | Canola | cytosol | 70.33 | 74.71 |
| Bra040545.1-P | Field mustard | mitochondrion | 69.96 | 74.32 |
| CDY37508 | Canola | mitochondrion | 69.96 | 74.32 |
| GSMUA_Achr9P17960_001 | Banana | mitochondrion | 63.0 | 65.9 |
| KRG94361 | Soybean | plastid | 60.81 | 62.41 |
| KRH07097 | Soybean | plastid | 57.14 | 62.4 |
| TraesCS2D01G338500.1 | Wheat | plastid | 58.24 | 59.77 |
| VIT_14s0066g00160.t01 | Wine grape | plastid | 61.9 | 59.51 |
| TraesCS2A01G324500.1 | Wheat | plastid | 57.88 | 59.4 |
| TraesCS2B01G357700.1 | Wheat | plastid | 57.51 | 59.02 |
| EES11004 | Sorghum | plastid | 58.97 | 58.97 |
| Zm00001d003276_P001 | Maize | plastid | 59.71 | 58.63 |
| Os04t0481300-01 | Rice | mitochondrion | 57.51 | 58.58 |
| Solyc02g093550.2.1 | Tomato | plastid | 60.44 | 57.69 |
| PGSC0003DMT400032845 | Potato | cytosol | 60.44 | 56.9 |
| AT4G29590.1 | Thale cress | plastid | 29.67 | 25.55 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.2 | EntrezGene:821098 | UniProt:A0A178V6M1 | ProteinID:AAF01549.1 | ProteinID:AEE73700.1 |
| ArrayExpress:AT3G01660 | EnsemblPlantsGene:AT3G01660 | RefSeq:AT3G01660 | TAIR:AT3G01660 | RefSeq:AT3G01660-TAIR-G | EnsemblPlants:AT3G01660.1 |
| TAIR:AT3G01660.1 | EMBL:BT010699 | EMBL:BT012427 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | GO:GO:0032259 | InterPro:Methyltransf_11 | RefSeq:NP_186815.1 |
| ProteinID:OAP01899.1 | PFAM:PF08241 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR43036 | PANTHER:PTHR43036:SF2 | UniProt:Q9SS89 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 |
| UniParc:UPI00000AA7F0 | : | : | : | : | : |
Description
At3g01660 [Source:UniProtKB/TrEMBL;Acc:Q9SS89]
Coordinates
chr3:+:245416..246854
Molecular Weight (calculated)
31763.9 Da
IEP (calculated)
8.797
GRAVY (calculated)
-0.421
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLRFNLQQ SPFQLKPRIL RPRITNISNR IDETDPRPSS SAGRIQRLVL NNEGRTKLNA DPDREFYSYP RFVNHVDDSF ISSLTELYRN RLRPGSTVLD
101: LMSSWVSHLP EEVKYEKVVG HGLNAQELAR NPRLDYFFVK DLNEDQKFEF EDKYFDAVLC SVGVQYLQQP EKVFAEVYRV LKPGGVLIVS FSNRMFYEKA
201: IRVWRDGTEY SRIQLVVQYF QSIEGFTQPE IIRQQPGAQI SVLTRLMGFI GLASTPDPFN AVIAYKNFKP IYE
101: LMSSWVSHLP EEVKYEKVVG HGLNAQELAR NPRLDYFFVK DLNEDQKFEF EDKYFDAVLC SVGVQYLQQP EKVFAEVYRV LKPGGVLIVS FSNRMFYEKA
201: IRVWRDGTEY SRIQLVVQYF QSIEGFTQPE IIRQQPGAQI SVLTRLMGFI GLASTPDPFN AVIAYKNFKP IYE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.