CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10001
KRH23330
KRH44167
KRH47141

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01660.1	KRH10001	AT3G13720.1	21798944
AT3G01660.1	KRH23330	AT3G13720.1	21798944
AT3G01660.1	KRH44167	AT3G13720.1	21798944
AT3G01660.1	KRH47141	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94361	Soybean	plastid	88.4	83.08
GSMUA_Achr9P17960_001	Banana	mitochondrion	62.8	60.15
VIT_14s0066g00160.t01	Wine grape	plastid	65.6	57.75
AT3G01660.1	Thale cress	cytosol, mitochondrion	62.4	57.14
Os04t0481300-01	Rice	mitochondrion	61.2	57.09
Solyc02g093550.2.1	Tomato	plastid	65.2	56.99
PGSC0003DMT400032845	Potato	cytosol	65.2	56.21
TraesCS2D01G338500.1	Wheat	plastid	59.6	56.02
TraesCS2B01G357700.1	Wheat	plastid	59.2	55.64
TraesCS2A01G324500.1	Wheat	plastid	59.2	55.64
EES11004	Sorghum	plastid	60.0	54.95
Zm00001d003276_P001	Maize	plastid	60.4	54.32
Bra040545.1-P	Field mustard	mitochondrion	55.6	54.09
CDY37508	Canola	mitochondrion	55.6	54.09
CDX77077	Canola	cytosol	55.6	54.09
KRH74154	Soybean	mitochondrion	28.0	27.13
KRH49054	Soybean	mitochondrion, plastid	32.4	26.91

Protein Annotations

EMBL:ACUP02009931	EnsemblPlants:KRH07097	EnsemblPlantsGene:GLYMA_16G067900	Gene3D:3.40.50.150	InterPro:SAM-dependent_MTases	PANTHER:PTHR43036
PANTHER:PTHR43036:SF2	ProteinID:KRH07097	ProteinID:KRH07097.1	SEG:seg	SUPFAM:SSF53335	UniParc:UPI0006ED7D67
UniProt:A0A0R0FW27	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:6729704..6731321

Molecular Weight (calculated)

28962.7 Da

IEP (calculated)

7.777

GRAVY (calculated)

-0.264

Length

250 amino acids

Sequence
(BLAST)

001: MQTNLQPISA PHTRTSIKIV STLNKSYHTN QPPLEGKIKR LVLTQEGRTK LNIYPDREFY AFPRFVKHVD DGFISTLTNL YRERLRPDME ILDLMSSWIS
101: HLPSDVKYKK VVGHGLNAQE LAKNPRLDFF VVKDLNKDQE FEFESFSFDA VLCIVSVQYL QQPEKSGGVF IVSFSNRMFY EKAISAWSEG TAYSRVQLVV
201: QYFQSVEGFT EPQENMSPIG WIMRLFGLIS ELDPFYAVIA YRSFKHIHDA

Best Arabidopsis Sequence Match ( AT3G01660.1 )
(BLAST)

001: MDSLRFNLQQ SPFQLKPRIL RPRITNISNR IDETDPRPSS SAGRIQRLVL NNEGRTKLNA DPDREFYSYP RFVNHVDDSF ISSLTELYRN RLRPGSTVLD
101: LMSSWVSHLP EEVKYEKVVG HGLNAQELAR NPRLDYFFVK DLNEDQKFEF EDKYFDAVLC SVGVQYLQQP EKVFAEVYRV LKPGGVLIVS FSNRMFYEKA
201: IRVWRDGTEY SRIQLVVQYF QSIEGFTQPE IIRQQPGAQI SVLTRLMGFI GLASTPDPFN AVIAYKNFKP IYE

Arabidopsis Description

At3g01660 [Source:UniProtKB/TrEMBL;Acc:Q9SS89]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.