Factsheet for GSMUA_Achr9P17960_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
nucleus 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr7P09070_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01660.1	GSMUA_Achr7P09070_001	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94361	Soybean	plastid	65.13	63.91
AT3G01660.1	Thale cress	cytosol, mitochondrion	65.9	63.0
KRH07097	Soybean	plastid	60.15	62.8
TraesCS2D01G338500.1	Wheat	plastid	63.22	62.03
VIT_14s0066g00160.t01	Wine grape	plastid	67.43	61.97
Os04t0481300-01	Rice	mitochondrion	63.6	61.94
TraesCS2A01G324500.1	Wheat	plastid	62.84	61.65
TraesCS2B01G357700.1	Wheat	plastid	62.84	61.65
Bra040545.1-P	Field mustard	mitochondrion	59.39	60.31
CDY37508	Canola	mitochondrion	59.39	60.31
EES11004	Sorghum	plastid	62.84	60.07
PGSC0003DMT400032845	Potato	cytosol	66.67	60.0
CDX77077	Canola	cytosol	59.0	59.92
Zm00001d003276_P001	Maize	plastid	63.6	59.71
Solyc02g093550.2.1	Tomato	plastid	63.98	58.39
GSMUA_Achr7P24050_001	Banana	plastid	34.48	28.85

Protein Annotations

EnsemblPlants:GSMUA_Achr9P17960_001	EnsemblPlants:GSMUA_Achr9T17960_001	EnsemblPlantsGene:GSMUA_Achr9G17960_001	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11
InterPro:SAM-dependent_MTases	PANTHER:PTHR43036	PANTHER:PTHR43036:SF2	PFAM:PF08241	SUPFAM:SSF53335	UniParc:UPI0002961F07
UniProt:M0U1A3	MapMan:35.2	:	:	:	:

Description

methyltransferase domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G17960_001]

Coordinates

chr9:+:12573005..12574340

Molecular Weight (calculated)

29700.5 Da

IEP (calculated)

8.197

GRAVY (calculated)

-0.118

Length

261 amino acids

Sequence
(BLAST)

001: MVTLRPPPHL PRIAAVSSSH SDPSRAAGEI KRLVLTSEGR TKLNTAPDRD FYAFPRFVTH VDAAFISALT GLYRERLAPG WAVLDLMSSW VSHLPQEVAY
101: ERVVGHGLNA RELARNPRLD YFFVKDLNRD QELQFEDCSF HAVVCAVSVQ YLQWPEKVFA EVFRVLKPGG VFIVSFSNRL FYEKAISAWR DGSDYSRVQL
201: VVQYFQSVDG FTQPEIVKNV PPKADASLLS GMMRLIGLYR TDPFYAVIAY RNFKPVYEEA E

Best Arabidopsis Sequence Match ( AT3G01660.1 )
(BLAST)

001: MDSLRFNLQQ SPFQLKPRIL RPRITNISNR IDETDPRPSS SAGRIQRLVL NNEGRTKLNA DPDREFYSYP RFVNHVDDSF ISSLTELYRN RLRPGSTVLD
101: LMSSWVSHLP EEVKYEKVVG HGLNAQELAR NPRLDYFFVK DLNEDQKFEF EDKYFDAVLC SVGVQYLQQP EKVFAEVYRV LKPGGVLIVS FSNRMFYEKA
201: IRVWRDGTEY SRIQLVVQYF QSIEGFTQPE IIRQQPGAQI SVLTRLMGFI GLASTPDPFN AVIAYKNFKP IYE

Arabidopsis Description

At3g01660 [Source:UniProtKB/TrEMBL;Acc:Q9SS89]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.