Factsheet for Bra040545.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra021502.1-P
Bra021503.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01660.1	Bra021502.1-P	AT3G13720.1	21798944
AT3G01660.1	Bra021503.1-P	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37508	Canola	mitochondrion	100.0	100.0
CDX77077	Canola	cytosol	98.44	98.44
AT3G01660.1	Thale cress	cytosol, mitochondrion	74.32	69.96
GSMUA_Achr9P17960_001	Banana	mitochondrion	60.31	59.39
KRG94361	Soybean	plastid	59.92	57.89
VIT_14s0066g00160.t01	Wine grape	plastid	63.42	57.39
TraesCS2A01G324500.1	Wheat	plastid	58.75	56.77
TraesCS2D01G338500.1	Wheat	plastid	58.75	56.77
Os04t0481300-01	Rice	mitochondrion	58.75	56.34
EES11004	Sorghum	plastid	59.53	56.04
TraesCS2B01G357700.1	Wheat	plastid	57.98	56.02
KRH07097	Soybean	plastid	54.09	55.6
Zm00001d003276_P001	Maize	plastid	56.42	52.16
Solyc02g093550.2.1	Tomato	plastid	57.98	52.1
PGSC0003DMT400032845	Potato	cytosol	58.37	51.72
Bra024142.1-P	Field mustard	plastid	28.79	24.03

Protein Annotations

EnsemblPlants:Bra040545.1	EnsemblPlants:Bra040545.1-P	EnsemblPlantsGene:Bra040545	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11
InterPro:SAM-dependent_MTases	PANTHER:PTHR43036	PANTHER:PTHR43036:SF2	PFAM:PF08241	SEG:seg	SUPFAM:SSF53335
UniParc:UPI000253EDAB	UniProt:M4FHG7	MapMan:35.2	:	:	:

Description

AT3G01660 (E=3e-071) | methyltransferase

Coordinates

chrScaffold000217:+:2019..2940

Molecular Weight (calculated)

29790.6 Da

IEP (calculated)

9.683

GRAVY (calculated)

-0.497

Length

257 amino acids

Sequence
(BLAST)

001: MDSLRFNLQQ SPFQLRPRRT IRPRITNISN QTEETDPRPP SSAGKIQRLV LNNEGRTKLN AGPDREFYSY PRFVNHVDDG FISSLTDLYR NRLRSGSIVL
101: DLMSSWELAR NPRLDYFFVK DLNEDQKLEF QDKYFDAVLC SVGVQYLQQP EKVFAEVYRV LKPGGALIVS FSNRMFYEKA IRVWRDGTEY GRVQLVVQYF
201: QSVQGFTQPE TIRQQPPLGG GAEKPVLNWF MGLIGLASRP DPFNAVIAYK NFKPLYE

Best Arabidopsis Sequence Match ( AT3G01660.1 )
(BLAST)

001: MDSLRFNLQQ SPFQLKPRIL RPRITNISNR IDETDPRPSS SAGRIQRLVL NNEGRTKLNA DPDREFYSYP RFVNHVDDSF ISSLTELYRN RLRPGSTVLD
101: LMSSWVSHLP EEVKYEKVVG HGLNAQELAR NPRLDYFFVK DLNEDQKFEF EDKYFDAVLC SVGVQYLQQP EKVFAEVYRV LKPGGVLIVS FSNRMFYEKA
201: IRVWRDGTEY SRIQLVVQYF QSIEGFTQPE IIRQQPGAQI SVLTRLMGFI GLASTPDPFN AVIAYKNFKP IYE

Arabidopsis Description

At3g01660 [Source:UniProtKB/TrEMBL;Acc:Q9SS89]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.