Factsheet for VIT_11s0016g02350.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47761	Canola	cytosol	34.92	89.43
Solyc07g025520.2.1	Tomato	cytosol, plastid	60.32	81.9
Os01t0712600-00	Rice	cytosol	61.59	78.54
KRH49054	Soybean	mitochondrion, plastid	73.65	77.08
KRH74154	Soybean	mitochondrion	60.63	74.03
CDY30212	Canola	plastid	70.79	72.4
CDY54271	Canola	plastid	70.16	71.75
PGSC0003DMT400008450	Potato	mitochondrion, plastid	71.75	71.52
Bra024142.1-P	Field mustard	plastid	69.52	71.1
AT4G29590.1	Thale cress	plastid	68.89	68.45
GSMUA_Achr7P24050_001	Banana	plastid	67.3	67.95
TraesCS3B01G278300.1	Wheat	mitochondrion	64.76	66.45
HORVU1Hr1G026880.1	Barley	cytosol, nucleus	17.46	66.27
HORVU7Hr1G052230.3	Barley	cytosol	33.02	65.41
TraesCS3A01G249400.2	Wheat	mitochondrion	63.17	64.82
TraesCS3D01G249400.1	Wheat	mitochondrion	63.17	64.82
HORVU5Hr1G055210.2	Barley	cytosol	33.02	64.6
HORVU6Hr1G044380.2	Barley	mitochondrion	33.33	62.13
KXG33235	Sorghum	plastid	65.4	59.88
Zm00001d011709_P003	Maize	plastid	63.17	56.53
HORVU3Hr1G067300.1	Barley	plastid	63.17	51.55
VIT_14s0066g00160.t01	Wine grape	plastid	27.62	30.63

Protein Annotations

EntrezGene:100268021	wikigene:100268021	Gene3D:3.40.50.150	MapMan:35.2	ProteinID:CBI27925	ProteinID:CBI27925.3
UniProt:D7TB90	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009507
GO:GO:0009536	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	EntrezGene:LOC100268021
wikigene:LOC100268021	InterPro:Methyltransf_11	PFAM:PF08241	PANTHER:PTHR43036	PANTHER:PTHR43036:SF1	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	TIGR:TC63823	TIGR:TC66413	TMHMM:TMhelix	UniParc:UPI00015C8A3B	ArrayExpress:VIT_11s0016g02350
EnsemblPlantsGene:VIT_11s0016g02350	EnsemblPlants:VIT_11s0016g02350.t01	unigene:Vvi.1377	RefSeq:XP_002282381	RefSeq:XP_002282381.1	SEG:seg

Description

No Description!

Coordinates

chr11:+:1892936..1896485

Molecular Weight (calculated)

34896.8 Da

IEP (calculated)

8.581

GRAVY (calculated)

-0.109

Length

315 amino acids

Sequence
(BLAST)

001: MASRLAATLH QRLPILAGVC TASVAFTVDS VPRFSKSLKK LKGKRRVVPR RLLLGLGASF WAQFVSMSGS GGIGGKFLVA SARQQGASSP VEQILKNVEW
101: PEQFPFKEED FQRFDETPDS IFYEGPRFVT HIDDQAIAAL TKYYSKVFPP SNTAGVSILD MCSSWVSHFP AGYKQDRVVG LGMNEEELKR NPVLTEHVVQ
201: DLNVNPKLPF EDNSFDVITN VVSVDYLTKP IDVFKEMCRI LKPGGLAIMS FSNRCFWTKA ISIWTSTGDA DHALIVGSYF HYAGGFEPPQ AVDISPNPGR
301: SDPMYIVYSR KLSTA

Best Arabidopsis Sequence Match ( AT4G29590.1 )
(BLAST)

001: MSKTANFLSL RSNPLPPIFS STGNSPFLRA SSALNLPTTA SKPFHSWIRA SSRRRLVLGG FGGASLWMNN NMSGKFGGKS FIASARQTNP SPVEQALNKV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SU88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.