Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G026880.1 | Barley | cytosol, nucleus | 39.75 | 77.11 |
| HORVU7Hr1G052230.3 | Barley | cytosol | 73.29 | 74.21 |
| HORVU6Hr1G044380.2 | Barley | mitochondrion | 47.2 | 44.97 |
| Os01t0712600-00 | Rice | cytosol | 68.94 | 44.94 |
| Solyc07g025520.2.1 | Tomato | cytosol, plastid | 64.6 | 44.83 |
| TraesCS3A01G249400.2 | Wheat | mitochondrion | 73.29 | 38.44 |
| CDY47761 | Canola | cytosol | 29.19 | 38.21 |
| TraesCS3D01G249400.1 | Wheat | mitochondrion | 72.67 | 38.11 |
| TraesCS3B01G278300.1 | Wheat | mitochondrion | 72.67 | 38.11 |
| KRH49054 | Soybean | mitochondrion, plastid | 63.35 | 33.89 |
| PGSC0003DMT400008450 | Potato | mitochondrion, plastid | 65.22 | 33.23 |
| CDY30212 | Canola | plastid | 63.35 | 33.12 |
| VIT_11s0016g02350.t01 | Wine grape | plastid | 64.6 | 33.02 |
| KRH74154 | Soybean | mitochondrion | 52.8 | 32.95 |
| Bra024142.1-P | Field mustard | plastid | 62.73 | 32.79 |
| CDY54271 | Canola | plastid | 62.11 | 32.47 |
| KXG33235 | Sorghum | plastid | 68.32 | 31.98 |
| Zm00001d011709_P003 | Maize | plastid | 69.57 | 31.82 |
| GSMUA_Achr7P24050_001 | Banana | plastid | 61.49 | 31.73 |
| HORVU3Hr1G067300.1 | Barley | plastid | 75.78 | 31.61 |
| AT4G29590.1 | Thale cress | plastid | 62.11 | 31.55 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G055210.2 | EnsemblPlantsGene:HORVU5Hr1G055210 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | GO:GO:0032259 | InterPro:Methyltransf_11 | InterPro:SAM-dependent_MTases |
| PANTHER:PTHR43036 | PANTHER:PTHR43036:SF1 | PFAM:PF08241 | SUPFAM:SSF53335 | UniParc:UPI000B47C8F3 | UniProt:A0A287RA83 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:433143778..433145852
Molecular Weight (calculated)
18372.3 Da
IEP (calculated)
4.910
GRAVY (calculated)
-0.003
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: FWSLDTEFYL APRFVTHIDD QAIRALTKYY LQALPPSNTH GVAILDMCSS WVGEPLSSGY KQENIVGMGM NEDELKKNPV LTEYVLQDLN LNPKLHFDDN
101: TFDVITNVVS VDYLTKPMDI FKEMRRILEP CGLAIMSFKI AAFGQKSYPF VHQLVMLTML G
101: TFDVITNVVS VDYLTKPMDI FKEMRRILEP CGLAIMSFKI AAFGQKSYPF VHQLVMLTML G
001: MSKTANFLSL RSNPLPPIFS STGNSPFLRA SSALNLPTTA SKPFHSWIRA SSRRRLVLGG FGGASLWMNN NMSGKFGGKS FIASARQTNP SPVEQALNKV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SU88]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.