CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0712600-00	Rice	cytosol	64.24	89.47
CDY47761	Canola	cytosol	29.07	81.3
TraesCS3D01G249400.1	Wheat	mitochondrion	70.93	79.48
TraesCS3B01G278300.1	Wheat	mitochondrion	69.77	78.18
TraesCS3A01G249400.2	Wheat	mitochondrion	69.19	77.52
HORVU1Hr1G026880.1	Barley	cytosol, nucleus	18.6	77.11
Solyc07g025520.2.1	Tomato	cytosol, plastid	51.74	76.72
Zm00001d011709_P003	Maize	plastid	78.49	76.7
GSMUA_Achr7P24050_001	Banana	plastid	64.53	71.15
HORVU7Hr1G052230.3	Barley	cytosol	32.56	70.44
HORVU5Hr1G055210.2	Barley	cytosol	31.98	68.32
HORVU6Hr1G044380.2	Barley	mitochondrion	32.85	66.86
VIT_11s0016g02350.t01	Wine grape	plastid	59.88	65.4
HORVU3Hr1G067300.1	Barley	plastid	72.67	64.77
PGSC0003DMT400008450	Potato	mitochondrion, plastid	58.72	63.92
KRH49054	Soybean	mitochondrion, plastid	55.81	63.79
KRH74154	Soybean	mitochondrion	47.67	63.57
CDY30212	Canola	plastid	56.69	63.31
CDY54271	Canola	plastid	56.4	62.99
Bra024142.1-P	Field mustard	plastid	55.81	62.34
AT4G29590.1	Thale cress	plastid	55.23	59.94
EES11004	Sorghum	plastid	25.0	31.5

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.2	EntrezGene:8059175	UniProt:C5XI85	ProteinID:EES03510.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009507	GO:GO:0009536	GO:GO:0016740	GO:GO:0032259
EnsemblPlants:KXG33235	ProteinID:KXG33235	ProteinID:KXG33235.1	InterPro:Methyltransf_11	PFAM:PF08241	PANTHER:PTHR43036
PANTHER:PTHR43036:SF1	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3003G275200	SUPFAM:SSF53335	unigene:Sbi.13337	UniParc:UPI0001A84C1C
RefSeq:XP_002458390.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:61130962..61134604

Molecular Weight (calculated)

37954.3 Da

IEP (calculated)

8.571

GRAVY (calculated)

-0.281

Length

344 amino acids

Sequence
(BLAST)

001: MALGGLASRY SLTDPPGTGT GTGTAPRPRS SRQEPMATIA PRSHLLLLGL TRPQQPTALR ACAAFSRSRG APVPPRAAQP RRVFLGLGAT FIDQVTRMAS
101: GGTSSRSFVA GARPRQGVSP VEQILKNVEW PDEFPFKPED FSRFDESSDT LFYSVPRFVT HIDDQAIRAL TEYYSEVLPP INTPGATILD MCSSWVSHYP
201: PGYKQEKIVG MGMNEDELKK NSVLTEYVVQ DLNVNPKLPF EDNTFDVITN VVSVDYLTKP IDVFKEMRRI LKPSGLAIMS FSNRCFWTKA ISIWTSTGDV
301: DHAWIVGAYF HYAGGFEPPQ AVDISPNPGR TDPMYAVCSR KKIG

Best Arabidopsis Sequence Match ( AT4G29590.1 )
(BLAST)

001: MSKTANFLSL RSNPLPPIFS STGNSPFLRA SSALNLPTTA SKPFHSWIRA SSRRRLVLGG FGGASLWMNN NMSGKFGGKS FIASARQTNP SPVEQALNKV
101: DWPETFPFKE EDFQRYDESS DSTFYEAPRF VTHIDDPAIA ALTKYYSKVL PQSDTPGVSI LDMCSSWVSH YPPGYRQERI VGMGMNEEEL KRNPVLTEYI
201: VQDLNLNSNL PFEDNSFQVI TNVVSVDYLT KPLEVFKEMN RILKPGGLAL MSFSNRCFFT KAISIWTSTG DADHALIVGS YFHYAGGFEA PQAVDISPNP
301: GRSDPMYVVY SRKLPMV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SU88]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.