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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d008982_P001
Zm00001d012776_P001
Zm00001d016041_P001
Zm00001d017390_P001
Zm00001d020229_P001
Zm00001d020729_P001
Zm00001d025939_P003
Zm00001d036342_P001
Zm00001d037453_P001
Zm00001d038768_P001
Zm00001d039316_P001
Zm00001d043551_P003
Zm00001d049553_P001
Zm00001d051288_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G50920.1 Zm00001d017390_P001 AT3G60600.1 21798944
AT3G50920.1 Zm00001d025939_P003 AT3G60600.1 21798944
AT3G50920.1 Zm00001d036342_P001 AT3G60600.1 21798944
AT3G50920.1 Zm00001d049553_P001 AT3G60600.1 21798944
AT3G50920.1 Zm00001d051288_P001 AT3G60600.1 21798944
AT3G50920.1 Zm00001d008982_P001 AT5G41600.1 21798944
AT3G50920.1 Zm00001d012776_P001 AT5G41600.1 21798944
AT3G50920.1 Zm00001d016041_P001 AT5G41600.1 21798944
AT3G50920.1 Zm00001d020229_P001 AT5G41600.1 21798944
AT3G50920.1 Zm00001d020729_P001 AT5G41600.1 21798944
AT3G50920.1 Zm00001d037453_P001 AT5G41600.1 21798944
AT3G50920.1 Zm00001d038768_P001 AT5G41600.1 21798944
AT3G50920.1 Zm00001d039316_P001 AT5G41600.1 21798944
AT3G50920.1 Zm00001d043551_P003 AT5G41600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU85552 Sorghum plastid 84.59 86.13
Zm00001d051561_P001 Maize plastid 82.8 73.57
TraesCS6A01G271900.1 Wheat mitochondrion 61.65 63.24
TraesCS6D01G252100.1 Wheat plastid 61.29 62.64
TraesCS6B01G299500.1 Wheat plastid 60.93 62.5
TraesCS6B01G299400.1 Wheat plastid 58.06 60.67
HORVU6Hr1G068790.1 Barley mitochondrion 58.42 60.15
TraesCS6A01G271800.1 Wheat plastid 58.06 59.34
Os02t0704500-01 Rice plastid 53.76 54.55
Bra005332.1-P Field mustard extracellular 13.26 47.44
Bra028216.1-P Field mustard extracellular 13.26 46.84
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 36.92 45.37
VIT_04s0023g02150.t01 Wine grape plasma membrane 33.69 41.96
Solyc02g062570.2.1 Tomato golgi, plasma membrane, vacuole 31.54 40.74
Bra012072.1-P Field mustard cytosol, peroxisome, plasma membrane 31.54 39.82
Bra037170.1-P Field mustard cytosol, peroxisome, plasma membrane 30.11 38.53
Solyc02g062580.2.1 Tomato plasma membrane 35.48 37.36
PGSC0003DMT400040097 Potato plastid 35.48 37.36
Bra006653.1-P Field mustard extracellular, plasma membrane 12.9 36.73
Bra031812.1-P Field mustard cytosol, peroxisome, plasma membrane 27.6 34.68
CDY45229 Canola plastid 32.62 34.21
KRH76744 Soybean plastid 34.77 33.92
Solyc02g084970.2.1 Tomato plasma membrane, plastid 32.97 33.45
KRH28718 Soybean plastid 34.41 33.22
CDY28991 Canola cytosol, endoplasmic reticulum, peroxisome 26.52 33.04
CDY50985 Canola plastid 32.62 32.5
PGSC0003DMT400009288 Potato extracellular, plasma membrane, vacuole 15.41 32.09
CDY28990 Canola plasma membrane 25.09 31.96
AT3G50920.1 Thale cress plastid 30.82 30.82
CDY65309 Canola plastid 30.11 30.0
CDX73772 Canola mitochondrion, plastid 26.88 29.88
PGSC0003DMT400009294 Potato cytosol, peroxisome, plasma membrane, plastid 32.62 29.45
CDX77963 Canola cytosol, golgi, peroxisome 22.58 26.92
Bra036849.1-P Field mustard cytosol, golgi, peroxisome 22.58 26.92
CDY52388 Canola cytosol, endoplasmic reticulum, golgi 13.26 25.87
CDY34432 Canola cytosol, plasma membrane, plastid 13.26 25.87
AT5G66450.3 Thale cress plastid 25.81 23.38
Bra012879.1-P Field mustard golgi, peroxisome, plasma membrane 28.67 17.43
CDX90676 Canola golgi, peroxisome, plasma membrane 27.6 16.78
Protein Annotations
EnsemblPlants:Zm00001d017767_P001EnsemblPlants:Zm00001d017767_T001EnsemblPlantsGene:Zm00001d017767EntrezGene:103627611Gene3D:1.20.144.10GO:GO:0005575
GO:GO:0016020GO:GO:0016021InterPro:P_Acid_Pase_2/haloperoxi_sfInterPro:P_Acid_Pase_2/haloperoxidasePANTHER:PTHR11247PANTHER:PTHR11247:SF25
PFAM:PF01569ProteinID:AQK73988.1SEG:segSUPFAM:SSF48317TMHMM:TMhelixUniParc:UPI00084562C9
UniProt:A0A1D6HHH8MapMan:5.2.2.4::::
Description
Lipid phosphate phosphatase epsilon 2 chloroplastic
Coordinates
chr5:+:206244670..206247552
Molecular Weight (calculated)
30755.1 Da
IEP (calculated)
11.159
GRAVY (calculated)
0.298
Length
279 amino acids
Sequence
(BLAST)
001: MPRLLLPSPS PRPCLNDSVR RPPLSKYRFF LPRTRRRPSP RLGVRMAEMT KVGSAGEPAE VGVSMESDPI VGGEAPSRPG WEASRWAPVE AALNRMSKWL
101: VAGSLAFAAI WKRDAEIMWF LLGAVGNSLL SMVLKKMLNH ERPAPALRSG PGMPSSHAQS IFYAATILAL SLYYWLGTNY LTMILGPATL SVAAYLVRIV
201: ALLTKSWLRV SRRLHTLNQV MAGAVVGSVV GALWFVLWHS LVQEAFASSL LVRIAVVLGS SAFCVGFVIY MIRHWLKDE
Best Arabidopsis Sequence Match ( AT5G66450.2 )
(BLAST)
001: MADLVKTNAR RDGEDRFQAL EQEAFISNSS SELQNELVSD AGDGIEAIAN RLSKWIVAAL FGSVLLLRHD GAALWAVIGS VSNSVLSVAL KRILNQERPV
101: ATLRSDPGMP SSHAQSISFI SVFSVFSVME WLGTNVLSLF LSGFILALGS YFTWLRVSQK LHTTSQVVVG AIVGSVYSTL WYVTWNSLVL EAFTSTFSVQ
201: IALFLVAAAS ALGFAVYVLL NWFKDDR
Arabidopsis Description
Phosphatidic acid phosphatase (PAP2) family protein [Source:TAIR;Acc:AT5G66450]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.