Factsheet for Bra036849.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

plastid 1
cytosol 1
plasma membrane 1
mitochondrion 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra003423.1-P
Bra006619.1-P
Bra007547.1-P
Bra012567.1-P
Bra013361.1-P
Bra014481.1-P
Bra020182.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50920.1	Bra003423.1-P	AT3G60600.1	21798944
AT3G50920.1	Bra007547.1-P	AT3G60600.1	21798944
AT3G50920.1	Bra014481.1-P	AT3G60600.1	21798944
AT3G50920.1	Bra012567.1-P	AT4G19030.1	21798944
AT3G50920.1	Bra013361.1-P	AT4G19030.1	21798944
AT3G50920.1	Bra002403.1-P	AT5G22290.1	21798944
AT3G50920.1	Bra006619.1-P	AT5G22290.1	21798944
AT3G50920.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77963	Canola	cytosol, golgi, peroxisome	100.0	100.0
Bra005332.1-P	Field mustard	extracellular	17.95	53.85
Bra028216.1-P	Field mustard	extracellular	17.95	53.16
Bra006653.1-P	Field mustard	extracellular, plasma membrane	17.52	41.84
Bra037170.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.62	37.16
Bra012072.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.76	35.75
AT3G50920.1	Thale cress	plastid	40.6	34.05
Bra031812.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.05	33.78
VIT_04s0023g02150.t01	Wine grape	plasma membrane	26.07	27.23
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	26.07	26.87
Solyc02g062570.2.1	Tomato	golgi, plasma membrane, vacuole	24.36	26.39
HORVU6Hr1G068790.1	Barley	mitochondrion	28.21	24.35
TraesCS6A01G271900.1	Wheat	mitochondrion	28.21	24.26
TraesCS6D01G252100.1	Wheat	plastid	28.21	24.18
TraesCS6B01G299500.1	Wheat	plastid	27.78	23.9
OQU85552	Sorghum	plastid	27.78	23.72
TraesCS6B01G299400.1	Wheat	plastid	26.5	23.22
PGSC0003DMT400009288	Potato	extracellular, plasma membrane, vacuole	13.25	23.13
TraesCS6A01G271800.1	Wheat	plastid	26.92	23.08
Zm00001d017767_P001	Maize	plastid	26.92	22.58
Os02t0704500-01	Rice	plastid	26.5	22.55
KRH28718	Soybean	plastid	27.78	22.49
Bra012879.1-P	Field mustard	golgi, peroxisome, plasma membrane	44.02	22.44
Solyc02g062580.2.1	Tomato	plasma membrane	25.21	22.26
PGSC0003DMT400040097	Potato	plastid	25.21	22.26
KRH76744	Soybean	plastid	26.92	22.03
Solyc02g084970.2.1	Tomato	plasma membrane, plastid	23.5	20.0
Zm00001d051561_P001	Maize	plastid	26.07	19.43
PGSC0003DMT400009294	Potato	cytosol, peroxisome, plasma membrane, plastid	23.5	17.8

Protein Annotations

EnsemblPlants:Bra036849.1	EnsemblPlants:Bra036849.1-P	EnsemblPlantsGene:Bra036849	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR11247	PANTHER:PTHR11247:SF25	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002542BFC	UniProt:M4F6Y9
MapMan:35.2	:	:	:	:	:

Description

AT3G50920 (E=7e-018) | phosphatidic acid phosphatase-related / PAP2-related

Coordinates

chrA09:-:25409684..25410577

Molecular Weight (calculated)

26787.0 Da

IEP (calculated)

10.605

GRAVY (calculated)

0.244

Length

234 amino acids

Sequence
(BLAST)

001: MTVLVKRFAS NDLSELWNEL VSRGRIEAIF NRLLSVFLKR LLNQARPATT SRTDPGMPSS HAQSMSFISV FAVLSDKSKL EPRHPLFPLP TVKTDWSMLL
101: LCSYGMAWNQ RSLPVPKHAH PRIGFIFCKC FNYSIRMLLN SFSFLVNQFA LISPSANVQI RLRVSQKLHT SNQVVVGGLM GSVFCIFRYK TWNLLLLEAY
201: ESSLLLQLYV FLVASAYTLA FAAYVVLNWF RHDR

Best Arabidopsis Sequence Match ( AT5G66450.2 )
(BLAST)

001: MADLVKTNAR RDGEDRFQAL EQEAFISNSS SELQNELVSD AGDGIEAIAN RLSKWIVAAL FGSVLLLRHD GAALWAVIGS VSNSVLSVAL KRILNQERPV
101: ATLRSDPGMP SSHAQSISFI SVFSVFSVME WLGTNVLSLF LSGFILALGS YFTWLRVSQK LHTTSQVVVG AIVGSVYSTL WYVTWNSLVL EAFTSTFSVQ
201: IALFLVAAAS ALGFAVYVLL NWFKDDR

Arabidopsis Description

Phosphatidic acid phosphatase (PAP2) family protein [Source:TAIR;Acc:AT5G66450]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.