Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- plasma membrane 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G50920.1 | HORVU2Hr1G091830.4 | AT3G60600.1 | 21798944 |
| AT3G50920.1 | HORVU6Hr1G060760.3 | AT3G60600.1 | 21798944 |
| AT3G50920.1 | HORVU7Hr1G071270.2 | AT3G60600.1 | 21798944 |
| AT3G50920.1 | HORVU7Hr1G088900.1 | AT4G19030.1 | 21798944 |
| AT3G50920.1 | HORVU1Hr1G082010.3 | AT5G41600.1 | 21798944 |
| AT3G50920.1 | HORVU3Hr1G030760.2 | AT5G41600.1 | 21798944 |
| AT3G50920.1 | HORVU3Hr1G069970.2 | AT5G41600.1 | 21798944 |
| AT3G50920.1 | HORVU7Hr1G075700.2 | AT5G41600.1 | 21798944 |
| AT3G50920.1 | HORVU7Hr1G081290.4 | AT5G41600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G271900.1 | Wheat | mitochondrion | 85.98 | 85.66 |
| TraesCS6D01G252100.1 | Wheat | plastid | 85.61 | 84.98 |
| TraesCS6B01G299500.1 | Wheat | plastid | 85.24 | 84.93 |
| TraesCS6A01G271800.1 | Wheat | plastid | 82.29 | 81.69 |
| TraesCS6B01G299400.1 | Wheat | plastid | 80.44 | 81.65 |
| OQU85552 | Sorghum | plastid | 63.84 | 63.14 |
| Zm00001d017767_P001 | Maize | plastid | 60.15 | 58.42 |
| Os02t0704500-01 | Rice | plastid | 57.93 | 57.09 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plasma membrane | 43.17 | 51.54 |
| Zm00001d051561_P001 | Maize | plastid | 57.2 | 49.36 |
| Solyc02g062570.2.1 | Tomato | golgi, plasma membrane, vacuole | 37.64 | 47.22 |
| VIT_04s0023g02150.t01 | Wine grape | plasma membrane | 38.75 | 46.88 |
| Bra005332.1-P | Field mustard | extracellular | 12.92 | 44.87 |
| Bra028216.1-P | Field mustard | extracellular | 12.92 | 44.3 |
| Bra006653.1-P | Field mustard | extracellular, plasma membrane | 15.13 | 41.84 |
| Bra012072.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 32.84 | 40.27 |
| Bra037170.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 31.73 | 39.45 |
| CDY28991 | Canola | cytosol, endoplasmic reticulum, peroxisome | 31.37 | 37.95 |
| Solyc02g062580.2.1 | Tomato | plasma membrane | 36.16 | 36.98 |
| PGSC0003DMT400040097 | Potato | plastid | 36.16 | 36.98 |
| Bra031812.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 30.26 | 36.94 |
| Solyc02g084970.2.1 | Tomato | plasma membrane, plastid | 36.16 | 35.64 |
| KRH28718 | Soybean | plastid | 37.64 | 35.29 |
| PGSC0003DMT400009288 | Potato | extracellular, plasma membrane, vacuole | 17.34 | 35.07 |
| KRH76744 | Soybean | plastid | 36.9 | 34.97 |
| AT3G50920.1 | Thale cress | plastid | 35.79 | 34.77 |
| CDY45229 | Canola | plastid | 33.95 | 34.59 |
| CDY28990 | Canola | plasma membrane | 27.31 | 33.79 |
| CDY50985 | Canola | plastid | 34.69 | 33.57 |
| CDX73772 | Canola | mitochondrion, plastid | 31.0 | 33.47 |
| PGSC0003DMT400009294 | Potato | cytosol, peroxisome, plasma membrane, plastid | 36.53 | 32.04 |
| CDY65309 | Canola | plastid | 32.47 | 31.43 |
| CDY34432 | Canola | cytosol, plasma membrane, plastid | 16.24 | 30.77 |
| CDY52388 | Canola | cytosol, endoplasmic reticulum, golgi | 15.13 | 28.67 |
| CDX77963 | Canola | cytosol, golgi, peroxisome | 24.35 | 28.21 |
| Bra036849.1-P | Field mustard | cytosol, golgi, peroxisome | 24.35 | 28.21 |
| AT5G66450.3 | Thale cress | plastid | 29.52 | 25.97 |
| Bra012879.1-P | Field mustard | golgi, peroxisome, plasma membrane | 32.1 | 18.95 |
| CDX90676 | Canola | golgi, peroxisome, plasma membrane | 31.73 | 18.74 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G068790.1 | EnsemblPlantsGene:HORVU6Hr1G068790 | Gene3D:1.20.144.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR11247 | PANTHER:PTHR11247:SF25 | PFAM:PF01569 | SEG:seg |
| SUPFAM:SSF48317 | TMHMM:TMhelix | UniParc:UPI000294AE75 | UniProt:M0Y5K2 | MapMan:5.2.2.4 | : |
Description
No Description!
Coordinates
chrchr6H:-:477164531..477167493
Molecular Weight (calculated)
29655.5 Da
IEP (calculated)
10.170
GRAVY (calculated)
0.401
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLSLPGPWP RVEPVRLNRL PHCKGRLLSL LRSRRLGVCM AEMTRVGSGS PREVGVSAGD GEGDAMLGCE KLPGPRAAAA ATATTRWTHV EVALNRMSKW
101: LVSASFAFAA LWKHDGEIMW ALMGAVANTV LSSVLKKLLN HERPAPALRS DPGMPSSHAQ SIFYAATFLV LSVFYWLGPN YLAMIIGATT IASASYLSWL
201: RVSQRLHTVN QILVGATVGS AFSAMWFALW HLLVREAFAS SLWVQIPVVL GSVVFCVAFV VYIIQHWLKD E
101: LVSASFAFAA LWKHDGEIMW ALMGAVANTV LSSVLKKLLN HERPAPALRS DPGMPSSHAQ SIFYAATFLV LSVFYWLGPN YLAMIIGATT IASASYLSWL
201: RVSQRLHTVN QILVGATVGS AFSAMWFALW HLLVREAFAS SLWVQIPVVL GSVVFCVAFV VYIIQHWLKD E
001: MADLVKTNAR RDGEDRFQAL EQEAFISNSS SELQNELVSD AGDGIEAIAN RLSKWIVAAL FGSVLLLRHD GAALWAVIGS VSNSVLSVAL KRILNQERPV
101: ATLRSDPGMP SSHAQSISFI SVFSVFSVME WLGTNVLSLF LSGFILALGS YFTWLRVSQK LHTTSQVVVG AIVGSVYSTL WYVTWNSLVL EAFTSTFSVQ
201: IALFLVAAAS ALGFAVYVLL NWFKDDR
101: ATLRSDPGMP SSHAQSISFI SVFSVFSVME WLGTNVLSLF LSGFILALGS YFTWLRVSQK LHTTSQVVVG AIVGSVYSTL WYVTWNSLVL EAFTSTFSVQ
201: IALFLVAAAS ALGFAVYVLL NWFKDDR
Arabidopsis Description
Phosphatidic acid phosphatase (PAP2) family protein [Source:TAIR;Acc:AT5G66450]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.