CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012072.1-P	Field mustard	cytosol, peroxisome, plasma membrane	82.33	99.09
CDY65309	Canola	plastid	94.74	90.0
CDY50985	Canola	plastid	73.68	70.0
AT5G66450.3	Thale cress	plastid	64.66	55.84
CDY28991	Canola	cytosol, endoplasmic reticulum, peroxisome	46.62	55.36
CDX73772	Canola	mitochondrion, plastid	47.37	50.2
CDY28990	Canola	plasma membrane	40.6	49.32
VIT_04s0023g02150.t01	Wine grape	plasma membrane	41.35	49.11
CDY52388	Canola	cytosol, endoplasmic reticulum, golgi	24.06	44.76
Solyc02g062570.2.1	Tomato	golgi, plasma membrane, vacuole	34.96	43.06
CDY34432	Canola	cytosol, plasma membrane, plastid	22.93	42.66
Solyc02g062580.2.1	Tomato	plasma membrane	40.98	41.13
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	34.21	40.09
PGSC0003DMT400040097	Potato	plastid	38.35	38.49
KRH76744	Soybean	plastid	41.35	38.46
KRH28718	Soybean	plastid	40.98	37.72
Os02t0704500-01	Rice	plastid	38.72	37.45
TraesCS6A01G271900.1	Wheat	mitochondrion	35.71	34.93
TraesCS6B01G299500.1	Wheat	plastid	35.71	34.93
TraesCS6D01G252100.1	Wheat	plastid	35.71	34.8
PGSC0003DMT400009288	Potato	extracellular, plasma membrane, vacuole	17.29	34.33
TraesCS6A01G271800.1	Wheat	plastid	34.96	34.07
HORVU6Hr1G068790.1	Barley	mitochondrion	34.59	33.95
TraesCS6B01G299400.1	Wheat	plastid	33.83	33.71
OQU85552	Sorghum	plastid	34.59	33.58
Solyc02g084970.2.1	Tomato	plasma membrane, plastid	34.59	33.45
CDX77963	Canola	cytosol, golgi, peroxisome	29.32	33.33
Zm00001d017767_P001	Maize	plastid	34.21	32.62
PGSC0003DMT400009294	Potato	cytosol, peroxisome, plasma membrane, plastid	34.96	30.1
CDX90676	Canola	golgi, peroxisome, plasma membrane	49.25	28.54
Zm00001d051561_P001	Maize	plastid	33.08	28.03

Protein Annotations

EnsemblPlants:CDY45229	EnsemblPlantsGene:GSBRNA2T00081664001	Gene3D:1.20.144.10	GO:A0A078I740	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:P_Acid_Pase_2/haloperoxi_sf	PANTHER:PTHR11247	PANTHER:PTHR11247:SF25	ProteinID:CDY45229	ProteinID:CDY45229.1
SEG:seg	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0004EDFA75	UniProt:A0A078I740	MapMan:5.2.2.4

Description

BnaA07g12610DBnaA07g12610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I740]

Coordinates

chrLK032618:+:121004..122146

Molecular Weight (calculated)

29000.7 Da

IEP (calculated)

9.132

GRAVY (calculated)

0.356

Length

266 amino acids

Sequence
(BLAST)

001: MAASSSSLVT FHKLTCSFCF GPSSAPAYLT SGRRRRFWSV SAPQTMADLV KTHARRDGEE ERFQALEQDA FINNPSNDLV SDGINAVANR LSKWVVAGLF
101: GSVLLLRHDG AALWAVIGSV SNSALSAALK RILNQERPVA TLRSDPGMPS SHAQSISFIS VFTIFSVVEW LGTNELSLFL SGLILALASY FTWLRVSQKL
201: HTTSQVVVGA IFGSVYSTLW YITWNSLVLE AFASSFSVQV AVFAISAASA LGFAIYVLLN WFKDDR

Best Arabidopsis Sequence Match ( AT5G66450.4 )
(BLAST)

001: MAASSSSLLL LHKPTYNFHF AASSVPTYIN SARFRISSSI FPLDRRRRRR IWSVSGFKSM ADLVKTNARR DGEDRFQALE QEAFISNSSS ELQNELVSDA
101: GDGIEAIANR LSKWIVAALF GSVLLLRHDG AALWAVIGSV SNSVLSVALK RILNQERPVA TLRSDPGMPS SHAQSISFIS VFSVFSVMEW LGTNVLSLFL
201: SGFILALGSY FTWLRVSQKL HTTSQVVVGA IVGSVYSTLW YVTWNSLVLE AFTSTFSVQI ALFLVAAASA LGFAVYVLLN WFKDDR

Arabidopsis Description

Phosphatidic acid phosphatase (PAP2) family protein [Source:TAIR;Acc:AT5G66450]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.