CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH11076
KRH21197
KRH22653
KRH26664
KRH41254
KRH42923
KRH42926
KRH45251
KRH59035
KRH59036
KRH59988
KRH65384
KRH76164

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50920.1	KRH65384	AT3G60600.1	21798944
AT3G50920.1	KRH76164	AT3G60600.1	21798944
AT3G50920.1	KRH11076	AT4G19030.1	21798944
AT3G50920.1	KRH21197	AT4G19030.1	21798944
AT3G50920.1	KRH42923	AT4G19030.1	21798944
AT3G50920.1	KRH42926	AT4G19030.1	21798944
AT3G50920.1	KRH45251	AT4G19030.1	21798944
AT3G50920.1	KRH59035	AT4G19030.1	21798944
AT3G50920.1	KRH59036	AT4G19030.1	21798944
AT3G50920.1	KRH22653	AT5G22290.1	21798944
AT3G50920.1	KRH26664	AT5G22290.1	21798944
AT3G50920.1	KRH41254	AT5G41600.1	21798944
AT3G50920.1	KRH59988	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76744	Soybean	plastid	90.31	91.26
VIT_04s0023g02150.t01	Wine grape	plasma membrane	46.02	59.38
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	40.14	51.1
Solyc02g062570.2.1	Tomato	golgi, plasma membrane, vacuole	38.06	50.93
PGSC0003DMT400040097	Potato	plastid	44.64	48.68
Solyc02g062580.2.1	Tomato	plasma membrane	43.25	47.17
Bra012072.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.99	47.06
Bra006653.1-P	Field mustard	extracellular, plasma membrane	15.57	45.92
Bra037170.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.87	43.58
Bra031812.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.87	42.79
Bra005332.1-P	Field mustard	extracellular	11.42	42.31
Bra028216.1-P	Field mustard	extracellular	11.42	41.77
CDY28991	Canola	cytosol, endoplasmic reticulum, peroxisome	31.83	41.07
CDY45229	Canola	plastid	37.72	40.98
AT3G50920.1	Thale cress	plastid	39.1	40.5
Solyc02g084970.2.1	Tomato	plasma membrane, plastid	38.41	40.36
TraesCS6B01G299500.1	Wheat	plastid	36.33	38.6
CDY50985	Canola	plastid	37.02	38.21
PGSC0003DMT400009288	Potato	extracellular, plasma membrane, vacuole	17.65	38.06
HORVU6Hr1G068790.1	Barley	mitochondrion	35.29	37.64
TraesCS6A01G271900.1	Wheat	mitochondrion	35.29	37.5
TraesCS6D01G252100.1	Wheat	plastid	35.29	37.36
CDY28990	Canola	plasma membrane	28.03	36.99
CDY65309	Canola	plastid	35.64	36.79
OQU85552	Sorghum	plastid	34.6	36.5
Os02t0704500-01	Rice	plastid	34.6	36.36
TraesCS6B01G299400.1	Wheat	plastid	33.56	36.33
TraesCS6A01G271800.1	Wheat	plastid	34.26	36.26
PGSC0003DMT400009294	Potato	cytosol, peroxisome, plasma membrane, plastid	38.75	36.25
CDX73772	Canola	mitochondrion, plastid	30.45	35.06
CDY52388	Canola	cytosol, endoplasmic reticulum, golgi	17.3	34.97
Zm00001d017767_P001	Maize	plastid	33.22	34.41
CDY34432	Canola	cytosol, plasma membrane, plastid	16.95	34.27
AT5G66450.3	Thale cress	plastid	35.29	33.12
Zm00001d051561_P001	Maize	plastid	31.49	28.98
CDX77963	Canola	cytosol, golgi, peroxisome	22.49	27.78
Bra036849.1-P	Field mustard	cytosol, golgi, peroxisome	22.49	27.78
CDX90676	Canola	golgi, peroxisome, plasma membrane	34.6	21.79
Bra012879.1-P	Field mustard	golgi, peroxisome, plasma membrane	34.26	21.57

Protein Annotations

Gene3D:1.20.144.10	EntrezGene:100784545	MapMan:5.2.2.4	EMBL:ACUP02006761	EnsemblPlantsGene:GLYMA_11G071400	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0006651	GO:GO:0008150	GO:GO:0008152	GO:GO:0008195	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311	GO:GO:0016787
UniProt:I1LHV8	EnsemblPlants:KRH28718	ProteinID:KRH28718	ProteinID:KRH28718.1	PANTHER:PTHR11247	PANTHER:PTHR11247:SF25
InterPro:P_Acid_Pase_2/haloperoxi_sf	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI00023CC183	:	:

Description

hypothetical protein

Coordinates

chr11:-:5324681..5328093

Molecular Weight (calculated)

32270.0 Da

IEP (calculated)

9.117

GRAVY (calculated)

0.352

Length

289 amino acids

Sequence
(BLAST)

001: MAAATTICYG PSSYILLGSN LLRQGHLKNT SFAHRFSPSR SFLCNGFVPR KPVLGRNSFW VSKTMDESAR TSAFRDGKGD ETIQVFEQEA FIDGSTPFQS
101: KFLSPEVEYN LNRMSKWIVT ALFGGFILWR HDAEALWFTA GSVLNAMLSV LLKRILNQER PSTLKSDPGM PSSHAQSIFF TVFFVILSGV EWLGLNGFTI
201: AISASVLTFG SFFVSSYLRV SQQLHTVSQV VVGAAIGSIF SILWYWLWNG YMLDAFVSSL WVRIIVVLGS AGLCIGFVLF AIRYWLQDD

Best Arabidopsis Sequence Match ( AT5G66450.4 )
(BLAST)

001: MAASSSSLLL LHKPTYNFHF AASSVPTYIN SARFRISSSI FPLDRRRRRR IWSVSGFKSM ADLVKTNARR DGEDRFQALE QEAFISNSSS ELQNELVSDA
101: GDGIEAIANR LSKWIVAALF GSVLLLRHDG AALWAVIGSV SNSVLSVALK RILNQERPVA TLRSDPGMPS SHAQSISFIS VFSVFSVMEW LGTNVLSLFL
201: SGFILALGSY FTWLRVSQKL HTTSQVVVGA IVGSVYSTLW YVTWNSLVLE AFTSTFSVQI ALFLVAAASA LGFAVYVLLN WFKDDR

Arabidopsis Description

Phosphatidic acid phosphatase (PAP2) family protein [Source:TAIR;Acc:AT5G66450]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.