Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH42926 | Soybean | plasma membrane | 93.7 | 92.34 |
KRH21197 | Soybean | cytosol, peroxisome, plasma membrane | 78.15 | 77.29 |
KRH11076 | Soybean | cytosol | 77.78 | 76.92 |
KRH59035 | Soybean | plasma membrane | 75.93 | 75.65 |
VIT_10s0003g01830.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 74.81 | 71.63 |
KRH42923 | Soybean | extracellular | 71.48 | 71.22 |
KRH45251 | Soybean | extracellular | 22.59 | 67.03 |
PGSC0003DMT400071510 | Potato | plasma membrane | 67.78 | 66.06 |
Solyc03g005980.2.1 | Tomato | plasma membrane | 67.41 | 65.7 |
AT4G18910.1 | Thale cress | golgi, peroxisome, vacuole | 71.11 | 65.31 |
CDY01565 | Canola | cytosol, peroxisome, plasma membrane | 71.11 | 64.43 |
Bra012567.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 71.11 | 64.43 |
CDX78905 | Canola | cytosol, peroxisome, plasma membrane | 70.74 | 64.31 |
Bra013361.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 70.74 | 64.31 |
CDX98596 | Canola | cytosol, peroxisome, plasma membrane | 70.74 | 64.09 |
CDX99411 | Canola | cytosol, peroxisome, plasma membrane | 70.37 | 63.97 |
Solyc02g071920.2.1 | Tomato | plasma membrane | 67.04 | 62.41 |
PGSC0003DMT400073246 | Potato | plasma membrane | 67.04 | 62.41 |
AT4G19030.1 | Thale cress | plasma membrane | 67.41 | 61.49 |
KRH50367 | Soybean | plasma membrane | 52.59 | 54.2 |
KRH15764 | Soybean | endoplasmic reticulum, extracellular, plastid, vacuole | 19.26 | 50.0 |
TraesCS7A01G355000.1 | Wheat | peroxisome | 50.74 | 49.1 |
KRH15118 | Soybean | plasma membrane | 47.41 | 49.04 |
TraesCS7B01G272700.1 | Wheat | plasma membrane | 50.37 | 48.75 |
TraesCS7D01G367800.1 | Wheat | golgi, peroxisome, plasma membrane | 50.0 | 48.39 |
KRH73019 | Soybean | cytosol, peroxisome, plasma membrane | 46.67 | 48.28 |
KXG20157 | Sorghum | golgi, nucleus, plasma membrane | 50.0 | 46.39 |
Os06t0552700-01 | Rice | cytosol, peroxisome, plastid | 45.19 | 44.69 |
KRH47396 | Soybean | plasma membrane | 28.52 | 42.08 |
KRH16737 | Soybean | cytosol, peroxisome, vacuole | 41.85 | 41.85 |
KRH47366 | Soybean | cytosol, plasma membrane, vacuole | 32.59 | 40.55 |
KRH47369 | Soybean | mitochondrion, plastid | 27.41 | 40.22 |
KRH35064 | Soybean | plastid | 44.07 | 39.8 |
Zm00001d046303_P001 | Maize | golgi, peroxisome, plasma membrane | 46.3 | 39.43 |
KRG91709 | Soybean | plastid | 36.67 | 38.82 |
KRH18910 | Soybean | plasma membrane | 35.56 | 38.25 |
KRH09661 | Soybean | plasma membrane, plastid | 41.48 | 36.84 |
KRH44534 | Soybean | plastid | 40.74 | 35.95 |
KRH01175 | Soybean | plastid | 39.26 | 35.93 |
KRH40096 | Soybean | plastid | 38.52 | 35.49 |
HORVU7Hr1G088900.1 | Barley | cytosol, golgi, plasma membrane | 26.3 | 33.65 |
KRH32130 | Soybean | plasma membrane | 32.59 | 31.88 |
KRH71310 | Soybean | plasma membrane | 33.33 | 30.41 |
GSMUA_Achr4P10230_001 | Banana | plastid | 23.33 | 20.06 |
Protein Annotations
Gene3D:1.20.1080.10 | EntrezGene:100798526 | MapMan:24.3.1.1 | EMBL:ACUP02003299 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
EnsemblPlantsGene:GLYMA_05G162600 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0015250 | GO:GO:0015267 |
GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | UniProt:I1K434 | InterPro:IPR023271 |
EnsemblPlants:KRH59036 | ProteinID:KRH59036 | ProteinID:KRH59036.1 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 |
PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF102 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 |
TMHMM:TMhelix | UniParc:UPI0001B379BC | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:35376373..35378991
Molecular Weight (calculated)
28690.9 Da
IEP (calculated)
10.102
GRAVY (calculated)
0.508
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MDENSATNGT HEVVLDVNRD VSRTTQASRS CVNVSFLQKL VAEVVGTYFL IFAGSASVVV NKNNNNVVTL PGISIVWGLV VMVLVYSVGH ISGAHFNPAV
101: TIAFASTKRF PLKQVPVYVV AQVVGSTLAS GTLRLLFSGK EAQFSGTLPS GSNLQAFVIE FLITFFLMFV VSGVATDNRA IGELAGIAVG STVLLNVMFA
201: GPITGASMNP ARSIGPAIVH KEYRGIWIYL VSPTLGAVAG AWVYNSIRYT DKPLREITKS ASFLKGVASR
101: TIAFASTKRF PLKQVPVYVV AQVVGSTLAS GTLRLLFSGK EAQFSGTLPS GSNLQAFVIE FLITFFLMFV VSGVATDNRA IGELAGIAVG STVLLNVMFA
201: GPITGASMNP ARSIGPAIVH KEYRGIWIYL VSPTLGAVAG AWVYNSIRYT DKPLREITKS ASFLKGVASR
001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
Arabidopsis Description
NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.