CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	golgi, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97393
KRH06324
KRH06326
KRH06327
KRH08190
KRH22653
KRH26664
KRH28715
KRH31520
KRH47747
KRH47748
KRH47750
KRH56393
KRH62532
KRH65384
KRH69884
KRH76090
KRH76164
KRH76747

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14360.1	KRH06324	AT1G01010.1	21798944
AT1G14360.1	KRH06326	AT1G01010.1	21798944
AT1G14360.1	KRH06327	AT1G01010.1	21798944
AT1G14360.1	KRH47747	AT1G01010.1	21798944
AT1G14360.1	KRH47748	AT1G01010.1	21798944
AT1G14360.1	KRH47750	AT1G01010.1	21798944
AT1G14360.1	KRG97393	AT1G27300.1	21798944
AT1G14360.1	KRH31520	AT1G27300.1	21798944
AT1G14360.1	KRH76090	AT1G27300.1	21798944
AT1G14360.1	KRH65384	AT3G60600.1	21798944
AT1G14360.1	KRH76164	AT3G60600.1	21798944
AT1G14360.1	KRH56393	AT4G26455.1	21798944
AT1G14360.1	KRH62532	AT4G26455.1	21798944
AT1G14360.1	KRH08190	AT5G66480.1	21798944
AT1G14360.1	KRH28715	AT5G66480.1	21798944
AT1G14360.1	KRH69884	AT5G66480.1	21798944
AT1G14360.1	KRH76747	AT5G66480.1	21798944
AT2G02810.1	KRH22653	AT5G22290.1	21798944
AT2G02810.1	KRH26664	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74812	Soybean	plasma membrane	74.02	28.48
KRH69315	Soybean	plasma membrane	74.02	28.48
Bra026835.1-P	Field mustard	plasma membrane	68.5	26.28
CDY33752	Canola	plasma membrane	68.5	26.28
Bra019657.1-P	Field mustard	plasma membrane	67.72	25.98
CDY49089	Canola	plasma membrane	67.72	25.98
AT1G14360.1	Thale cress	plasma membrane	67.72	25.98
CDY39320	Canola	plasma membrane	66.93	25.68
AT2G02810.1	Thale cress	plasma membrane	62.99	24.1
CDY41674	Canola	plasma membrane	62.2	23.8
GSMUA_AchrUn_...	Banana	plasma membrane	63.78	22.95
Bra026579.1-P	Field mustard	peroxisome	62.2	21.82
CDY09353	Canola	plasma membrane	62.2	21.64
EER88586	Sorghum	mitochondrion	58.27	20.44
Zm00001d046467_P001	Maize	golgi, peroxisome, plasma membrane	57.48	20.22
TraesCS7B01G258500.1	Wheat	golgi, mitochondrion, plastid	56.69	20.17
HORVU7Hr1G085180.1	Barley	golgi, mitochondrion, plastid	56.69	20.17
TraesCS7D01G353100.1	Wheat	golgi, mitochondrion, plasma membrane	56.69	20.11
Os06t0593100-01	Rice	golgi, peroxisome, plasma membrane	56.69	20.11
TraesCS7A01G370000.1	Wheat	golgi, mitochondrion, plasma membrane	55.91	19.72
Zm00001d036940_P003	Maize	cytosol, mitochondrion, plasma membrane	54.33	18.4
Zm00001d036936_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome	41.73	15.59
KRH29863	Soybean	extracellular, mitochondrion, plasma membrane	24.41	14.22
KRG88431	Soybean	plasma membrane	13.39	10.97
KRH23010	Soybean	cytosol, peroxisome, plasma membrane	29.13	10.51
KRH10309	Soybean	plasma membrane	25.98	9.4
KRH24858	Soybean	plasma membrane	25.2	9.07
KRH00671	Soybean	endoplasmic reticulum	19.68	6.98
KRH40518	Soybean	plasma membrane	18.9	6.7
KRH65169	Soybean	plasma membrane	13.39	5.54
KRH65174	Soybean	plasma membrane	13.39	5.52
PGSC0003DMT400000700	Potato	endoplasmic reticulum	2.36	3.85
GSMUA_Achr10P...	Banana	extracellular	2.36	2.16
KRH29862	Soybean	cytosol	0.79	0.74

Protein Annotations

MapMan:24.2.1.1.5	EMBL:ACUP02010974	EnsemblPlantsGene:GLYMA_18G123700	GO:GO:0003674	GO:GO:0005215	GO:GO:0005459
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030173	GO:GO:0030176
GO:GO:0055085	GO:GO:0072334	UniProt:K7MRL5	EnsemblPlants:KRG99133	ProteinID:KRG99133	ProteinID:KRG99133.1
PFAM:PF08449	PANTHER:PTHR10778	PANTHER:PTHR10778:SF10	SignalP:SignalP-TM	InterPro:UAA	UniParc:UPI000296C7FA

Description

hypothetical protein

Coordinates

chr18:-:16024595..16025761

Molecular Weight (calculated)

14748.0 Da

IEP (calculated)

9.151

GRAVY (calculated)

0.096

Length

127 amino acids

Sequence
(BLAST)

001: MLSLGYWLCF LNLVFDGFTN ATHDSLKARY PNTSAWNAVC FCKKHPDATW DIFLYCCCGA IGQNFVFLTI NRFGSLVNTT ITTTCKFWES PINKSRQWGC
101: VLMVFSGLSY QIYLKWQKLQ RLQRKAM

Best Arabidopsis Sequence Match ( AT1G14360.1 )
(BLAST)

001: MESHGSGLRR VLLLSFCVAG IWAAYIYQGI LQETLSTKKF GEDGKRFEHL AFLNLAQNVI CLVWSYIMIK LWSNGGSGGA PWWTYWSAGI TNTIGPAMGI
101: EALKYISYPA QVLAKSSKMI PVMLMGSLVY GIRYTLPEYL CTFLVAGGVS MFALLKTSSK TISKLAHPNA PLGYGLCFLN LAFDGFTNAT QDSITARYPK
201: TNAWDIMLGM NLWGTIYNMV YMFGLPHGSG FEAVQFCKQH PEAAWDILMY CLCGAVGQNF IFLTISRFGS LANTTITTTR KFVSIVVSSV LSGNPLSSKQ
301: WGCVSMVFGG LSYQIYLKWR KLQRMQKKKK A

Arabidopsis Description

UTR3UDP-galactose/UDP-glucose transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.