Factsheet for GSMUA_AchrUn_randomP03810_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P12060_001
GSMUA_Achr1P20280_001
GSMUA_Achr2P22980_001
GSMUA_Achr3P04120_001
GSMUA_Achr4P01630_001
GSMUA_Achr5P20880_001
GSMUA_Achr6P08980_001
GSMUA_Achr8P11120_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14360.1	GSMUA_Achr11P...	AT3G60600.1	21798944
AT1G14360.1	GSMUA_Achr11P...	AT3G60600.1	21798944
AT1G14360.1	GSMUA_Achr1P20280_001	AT3G60600.1	21798944
AT1G14360.1	GSMUA_Achr5P20880_001	AT3G60600.1	21798944
AT1G14360.1	GSMUA_Achr8P11120_001	AT3G60600.1	21798944
AT1G14360.1	GSMUA_Achr10P...	AT4G26455.1	21798944
AT1G14360.1	GSMUA_Achr3P04120_001	AT4G26455.1	21798944
AT1G14360.1	GSMUA_Achr4P01630_001	AT4G26455.1	21798944
AT1G14360.1	GSMUA_Achr1P12060_001	AT5G66480.1	21798944
AT1G14360.1	GSMUA_Achr2P22980_001	AT5G66480.1	21798944
AT1G14360.1	GSMUA_Achr6P08980_001	AT5G66480.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400002255	Potato	plastid	56.66	84.75
Bra026835.1-P	Field mustard	plasma membrane	78.19	83.38
CDY33752	Canola	plasma membrane	78.19	83.38
KRH74812	Soybean	plasma membrane	77.9	83.33
Bra019657.1-P	Field mustard	plasma membrane	77.9	83.08
CDY49089	Canola	plasma membrane	77.9	83.08
AT1G14360.1	Thale cress	plasma membrane	77.62	82.78
CDY39320	Canola	plasma membrane	77.34	82.48
KRH69315	Soybean	plasma membrane	76.77	82.12
VIT_01s0026g01890.t01	Wine grape	extracellular	77.05	81.93
Solyc01g010650.2.1	Tomato	plasma membrane	77.05	81.68
PGSC0003DMT400065812	Potato	plasma membrane	76.77	81.63
CDY41674	Canola	plasma membrane	75.07	79.82
AT2G02810.1	Thale cress	plasma membrane	75.07	79.82
Solyc05g007150.2.1	Tomato	plasma membrane	77.9	78.8
CDY09353	Canola	plasma membrane	75.07	72.6
GSMUA_Achr10P...	Banana	extracellular	28.33	71.94
Os06t0593100-01	Rice	golgi, peroxisome, plasma membrane	72.24	71.23
TraesCS7D01G353100.1	Wheat	golgi, mitochondrion, plasma membrane	71.67	70.67
HORVU7Hr1G085180.1	Barley	golgi, mitochondrion, plastid	71.39	70.59
Zm00001d046467_P001	Maize	golgi, peroxisome, plasma membrane	71.95	70.36
TraesCS7A01G370000.1	Wheat	golgi, mitochondrion, plasma membrane	71.67	70.28
EER88586	Sorghum	mitochondrion	71.95	70.17
TraesCS7B01G258500.1	Wheat	golgi, mitochondrion, plastid	70.82	70.03
Bra026579.1-P	Field mustard	peroxisome	68.56	66.85
Zm00001d036940_P003	Maize	cytosol, mitochondrion, plasma membrane	67.99	64.0
KRG99133	Soybean	extracellular	22.95	63.78
Zm00001d036936_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome	56.37	58.53
GSMUA_Achr6P33190_001	Banana	extracellular	12.46	30.77
GSMUA_Achr1P07960_001	Banana	plasma membrane	18.98	19.53
PGSC0003DMT400000700	Potato	endoplasmic reticulum	3.97	17.95

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP03810_001	EnsemblPlants:GSMUA_AchrUn_randomT03810_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG03810_001	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:UAA	PANTHER:PTHR10778	PANTHER:PTHR10778:SF10
PFAM:PF08449	SEG:seg	TMHMM:TMhelix	UniParc:UPI000295DCCB	UniProt:M0U643	MapMan:24.2.1.1.5

Description

Putative UDP-galactose transporter homolog 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG03810_001]

Coordinates

chrchrUn_random:-:17515519..17518979

Molecular Weight (calculated)

38910.0 Da

IEP (calculated)

9.767

GRAVY (calculated)

0.396

Length

353 amino acids

Sequence
(BLAST)

001: MEGHGAAAGV ERVVLLALCV AGIWSAYIYQ GVLQETVSTK LFGPDGKRFE HLSFLNLAQN VVCFVWSLIM IKLWSRSSSG GAPLWSYWSP SITNTIGPSM
101: GIEALKYISY PAQAMVLCIM SHMIISHVLY SIVLAKSTKM IPVMLMGTLV YGIKYTIPEY ICTFLVAGGV SSFALLKTSS KTISKLAHPN APLGYGLCFL
201: NLAFDGFTNA TQDSIKARYP KTSAWDIMLG MNLWGSIYNV IYMFGWPRGS GYEAVRFCQE HPEAAWDILM YCLCGAVGQN FIFLTISRFG SLANTTITTT
301: RKFVSIVVSS VISGNPLSQK QWASVVMVFS GLSLQIVLKW RKLQGTKKDK KRA

Best Arabidopsis Sequence Match ( AT1G14360.1 )
(BLAST)

001: MESHGSGLRR VLLLSFCVAG IWAAYIYQGI LQETLSTKKF GEDGKRFEHL AFLNLAQNVI CLVWSYIMIK LWSNGGSGGA PWWTYWSAGI TNTIGPAMGI
101: EALKYISYPA QVLAKSSKMI PVMLMGSLVY GIRYTLPEYL CTFLVAGGVS MFALLKTSSK TISKLAHPNA PLGYGLCFLN LAFDGFTNAT QDSITARYPK
201: TNAWDIMLGM NLWGTIYNMV YMFGLPHGSG FEAVQFCKQH PEAAWDILMY CLCGAVGQNF IFLTISRFGS LANTTITTTR KFVSIVVSSV LSGNPLSSKQ
301: WGCVSMVFGG LSYQIYLKWR KLQRMQKKKK A

Arabidopsis Description

UTR3UDP-galactose/UDP-glucose transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.