Factsheet for PGSC0003DMT400000700

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 3
plasma membrane 4
golgi 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400009054
PGSC0003DMT400015077
PGSC0003DMT400022426
PGSC0003DMT400050482
PGSC0003DMT400056956
PGSC0003DMT400084737

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14360.1	PGSC0003DMT400084737	AT1G27300.1	21798944
AT1G14360.1	PGSC0003DMT400022426	AT4G26455.1	21798944
AT1G14360.1	PGSC0003DMT400056956	AT4G26455.1	21798944
AT1G14360.1	PGSC0003DMT400009054	AT5G66480.1	21798944
AT2G02810.1	PGSC0003DMT400015077	AT5G22290.1	21798944
AT2G02810.1	PGSC0003DMT400050482	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058582	Potato	plasma membrane	61.54	13.71
GSMUA_Achr10P...	Banana	extracellular	11.54	6.47
PGSC0003DMT400028218	Potato	peroxisome, plasma membrane, vacuole	16.67	5.42
CDY41674	Canola	plasma membrane	20.51	4.82
AT2G02810.1	Thale cress	plasma membrane	19.23	4.52
CDY09353	Canola	plasma membrane	20.51	4.38
Zm00001d036940_P003	Maize	cytosol, mitochondrion, plasma membrane	19.23	4.0
GSMUA_AchrUn_...	Banana	plasma membrane	17.95	3.97
CDY39320	Canola	plasma membrane	16.67	3.93
CDY49089	Canola	plasma membrane	16.67	3.93
CDY33752	Canola	plasma membrane	16.67	3.93
Bra026835.1-P	Field mustard	plasma membrane	16.67	3.93
Bra019657.1-P	Field mustard	plasma membrane	16.67	3.93
PGSC0003DMT400040212	Potato	plasma membrane	16.67	3.92
PGSC0003DMT400065812	Potato	plasma membrane	16.67	3.92
Os06t0593100-01	Rice	golgi, peroxisome, plasma membrane	17.95	3.91
HORVU7Hr1G085180.1	Barley	golgi, mitochondrion, plastid	16.67	3.64
TraesCS7B01G258500.1	Wheat	golgi, mitochondrion, plastid	16.67	3.64
TraesCS7D01G353100.1	Wheat	golgi, mitochondrion, plasma membrane	16.67	3.63
TraesCS7A01G370000.1	Wheat	golgi, mitochondrion, plasma membrane	16.67	3.61
EER88586	Sorghum	mitochondrion	16.67	3.59
Bra026579.1-P	Field mustard	peroxisome	16.67	3.59
Zm00001d036936_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome	15.38	3.53
Zm00001d046467_P001	Maize	golgi, peroxisome, plasma membrane	15.38	3.32
AT1G14360.1	Thale cress	plasma membrane	14.1	3.32
KRG99133	Soybean	extracellular	3.85	2.36
PGSC0003DMT400002255	Potato	plastid	6.41	2.12
PGSC0003DMT400000002	Potato	plasma membrane	5.13	1.44

Protein Annotations

EnsemblPlants:PGSC0003DMT400000700	EnsemblPlantsGene:PGSC0003DMG400000251	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR10778
PANTHER:PTHR10778:SF29	PGSC:PGSC0003DMG400000251	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002959AE3	UniProt:M0ZH67
MapMan:35.2	:	:	:	:	:

Description

Adenosine 3'-phospho 5'-phosphosulfate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400000251]

Coordinates

chr1:+:71266068..71266811

Molecular Weight (calculated)

9086.1 Da

IEP (calculated)

7.662

GRAVY (calculated)

0.637

Length

78 amino acids

Sequence
(BLAST)

1: MKNDDQALFL FGISLSTRPR WQQFLLCSSG FFFGYLVNGV CEASFMNLYF LFCNFFVCCL VTKNCPFFIW CLVTEKSS

Best Arabidopsis Sequence Match ( AT4G23010.2 )
(BLAST)

001: MKEEQTRSLF GISLSDKPTW QQFLICTSGF FFGYLVNGVC EEYVYNRLQF SFGWYFTFIQ GFVYLFLIYL QGFTTKHIVN PMRTYVKLSA VLMGSHGLTK
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQA
201: RKLKKTRLTL VMCVVQMEML FCSTVVGLPF LFVPMVLTGE VFRAWTACAQ HPYVYGVLVF EAMATFIGQV SVLSLIALFG AATTALITTA RKGVTLLLSY
301: LIFTKPLTEQ HGSGLLLIAM GIVLKMVPMD SKAPAKIPAR PAVRIAGGDG DREEDEERKS LV

Arabidopsis Description

UTR2UDP-galactose transporter 2 [Source:TAIR;Acc:AT4G23010]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.