Factsheet for PGSC0003DMT400000002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g091840.2.1	Tomato	endoplasmic reticulum, plasma membrane	97.47	75.84
KRG88431	Soybean	plasma membrane	33.21	59.35
Bra016764.1-P	Field mustard	cytosol, peroxisome, plasma membrane	72.92	57.71
CDY70445	Canola	cytosol, peroxisome, plasma membrane	72.92	57.71
CDY58606	Canola	cytosol, peroxisome, plasma membrane	72.92	57.71
AT1G12600.1	Thale cress	plasma membrane	72.2	57.31
VIT_15s0048g01060.t01	Wine grape	plasma membrane	70.4	56.03
Os03t0118200-01	Rice	golgi, peroxisome, plasma membrane	70.04	55.59
KRH00671	Soybean	endoplasmic reticulum	71.84	55.59
KRH40518	Soybean	plasma membrane	71.84	55.59
GSMUA_Achr1P07960_001	Banana	plasma membrane	68.59	55.39
Bra019340.1-P	Field mustard	plasma membrane	68.95	55.2
EER95630	Sorghum	golgi, peroxisome, plasma membrane	68.59	53.82
PGSC0003DMT400058582	Potato	plasma membrane	67.51	53.43
HORVU4Hr1G085820.1	Barley	plasma membrane	65.34	53.39
TraesCS4B01G353800.1	Wheat	plasma membrane	67.51	53.28
CDX94144	Canola	plasma membrane	68.95	53.06
TraesCS5A01G521500.1	Wheat	plasma membrane	67.51	52.97
TraesCS4D01G347700.1	Wheat	plasma membrane	66.43	52.87
Bra013669.1-P	Field mustard	plasma membrane	67.15	52.39
Zm00001d048499_P001	Maize	plasma membrane	66.43	50.0
AT4G23010.3	Thale cress	plasma membrane	68.23	48.21
CDY41258	Canola	plasma membrane	67.51	46.75
CDX98783	Canola	plasma membrane	62.45	46.13
CDY10844	Canola	plasma membrane	66.79	42.92
KRH65169	Soybean	plasma membrane	36.46	32.9
KRH65174	Soybean	plasma membrane	36.46	32.79
PGSC0003DMT400002255	Potato	plastid	20.58	24.15
PGSC0003DMT400065812	Potato	plasma membrane	22.38	18.67
PGSC0003DMT400040212	Potato	plasma membrane	21.3	17.77
PGSC0003DMT400028218	Potato	peroxisome, plasma membrane, vacuole	14.44	16.67
PGSC0003DMT400000700	Potato	endoplasmic reticulum	1.44	5.13

Protein Annotations

EnsemblPlants:PGSC0003DMT400000002	EnsemblPlantsGene:PGSC0003DMG400000001	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:UAA	PANTHER:PTHR10778	PANTHER:PTHR10778:SF29	PFAM:PF08449
PGSC:PGSC0003DMG400000001	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002963C0A	UniProt:M0ZFX9	MapMan:24.2.1.1.5

Description

Adenosine 3'-phospho 5'-phosphosulfate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400000001]

Coordinates

chr1:+:71266900..71269530

Molecular Weight (calculated)

30610.2 Da

IEP (calculated)

7.882

GRAVY (calculated)

0.403

Length

277 amino acids

Sequence
(BLAST)

001: MVNPWKDYVK LSTVLMGSHG LTKGSLAFLN YPAQIMFKSA KVLPVMVMGA FVPGLRRKYP PHEYVSAVLL VAGLILFTLA DAQTSPNFSL IGVLMISGAL
101: VMDSFVGNYQ EAIFTSNPNT TQMEMLYCST IVGFPILFVA MIVTGELRIA WPACAQHPYV YGVLVFEACA TFVGQVSVLS LVAIFGAATT TMITTARKAV
201: TLLLSYLIFT KPLTEQHGTG LLLMCMCIIM KMLPENKPPH PRPQKIIPLQ QTEKPRETED DRFQIGIEEE EEKRPLV

Best Arabidopsis Sequence Match ( AT1G12600.1 )
(BLAST)

001: MKTNSEEQMI KLFGIPLSDK PRWQQFLICS SGFFFGYLVN GICEEYVYNR LKFSYGWYFT FAQGLVYIAL IYMYGFRTKQ MVNPWKTYVK LSGVLMGSHG
101: LTKGSLAYLN YPAQIMFKST KVLPVMVMGA FIPGLRRKYP VHEYISAMLL VIGLILFTLA DAHTSPNFSI IGVMMISGAL IMDAFLGNLQ EAIFTMNPET
201: TQMEMLFCST VVGLPFLLAP MILTGELFTA WNSCAQHPYV YGVLVFEAMA TFIGQVSVLS LIALFGAATT AMITTARKAV TLLLSYLIFT KPLTEQHGTG
301: LLLIFMGIIL KMVPDPNPNP KSSGSGQTPG KLERVKFEKE DDEESRPLV

Arabidopsis Description

UTR4UDP-galactose/UDP-glucose transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDX3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.