Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019340.1-P | Field mustard | plasma membrane | 84.44 | 95.66 |
| CDX94144 | Canola | plasma membrane | 84.44 | 91.94 |
| Bra013669.1-P | Field mustard | plasma membrane | 78.06 | 86.2 |
| CDY41258 | Canola | plasma membrane | 82.91 | 81.25 |
| AT1G12600.1 | Thale cress | plasma membrane | 69.39 | 77.94 |
| CDX98783 | Canola | plasma membrane | 74.49 | 77.87 |
| KRH00671 | Soybean | endoplasmic reticulum | 70.92 | 77.65 |
| VIT_02s0025g04490.t01 | Wine grape | plasma membrane | 69.13 | 77.43 |
| KRH40518 | Soybean | plasma membrane | 70.66 | 77.37 |
| Os03t0118200-01 | Rice | golgi, peroxisome, plasma membrane | 68.88 | 77.36 |
| HORVU4Hr1G085820.1 | Barley | plasma membrane | 66.58 | 76.99 |
| Solyc08g080270.2.1 | Tomato | plasma membrane | 62.24 | 76.73 |
| VIT_15s0048g01060.t01 | Wine grape | plasma membrane | 67.09 | 75.57 |
| TraesCS4B01G353800.1 | Wheat | plasma membrane | 67.6 | 75.5 |
| GSMUA_Achr1P07960_001 | Banana | plasma membrane | 65.82 | 75.22 |
| TraesCS5A01G521500.1 | Wheat | plasma membrane | 67.6 | 75.07 |
| EER95630 | Sorghum | golgi, peroxisome, plasma membrane | 66.84 | 74.22 |
| TraesCS4D01G347700.1 | Wheat | plasma membrane | 65.56 | 73.85 |
| CDY10844 | Canola | plasma membrane | 80.36 | 73.09 |
| PGSC0003DMT400058582 | Potato | plasma membrane | 63.78 | 71.43 |
| Zm00001d048499_P001 | Maize | plasma membrane | 65.05 | 69.29 |
| Solyc01g091840.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 62.24 | 68.54 |
| PGSC0003DMT400000002 | Potato | plasma membrane | 48.21 | 68.23 |
| KRG88431 | Soybean | plasma membrane | 25.77 | 65.16 |
| KRH65169 | Soybean | plasma membrane | 35.97 | 45.93 |
| KRH65174 | Soybean | plasma membrane | 35.71 | 45.45 |
| AT2G02810.1 | Thale cress | plasma membrane | 18.37 | 21.69 |
| AT5G59740.1 | Thale cress | plasma membrane | 18.88 | 21.51 |
| AT1G14360.1 | Thale cress | plasma membrane | 18.11 | 21.45 |
| AT3G46180.1 | Thale cress | peroxisome, plasma membrane, vacuole | 18.37 | 20.75 |
Protein Annotations
| MapMan:24.2.1.1.5 | EntrezGene:828400 | ProteinID:AEE84694.1 | ArrayExpress:AT4G23010 | EnsemblPlantsGene:AT4G23010 | RefSeq:AT4G23010 |
| TAIR:AT4G23010 | RefSeq:AT4G23010-TAIR-G | EnsemblPlants:AT4G23010.3 | TAIR:AT4G23010.3 | Symbol:ATUTR2 | Unigene:At.23149 |
| ncoils:Coil | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 | RefSeq:NP_001190806.1 | PFAM:PF08449 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR10778 | PANTHER:PTHR10778:SF29 | TMHMM:TMhelix |
| InterPro:UAA | UniParc:UPI0001E92F3A | Symbol:UTR2 | SEG:seg | : | : |
Description
UTR2UDP-galactose transporter 2 [Source:TAIR;Acc:AT4G23010]
Coordinates
chr4:-:12060184..12062858
Molecular Weight (calculated)
43644.2 Da
IEP (calculated)
8.278
GRAVY (calculated)
0.491
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEEQTRSLF GISLSDKPTW QQFLICTSGF FFGYLVNGVC EEYVYNRLQF SFGWYFTFIQ GFVYLFLIYL QGFTTKHIVN PMRTYVKLSA VLMGSHGLTK
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQM
201: EMLFCSTVVG LPFLFVPMVL TGEVFRAWTA CAQSSILSES DKEWNLLFGF ESTSIDLTRF MIQTGVGLSL EKKSKFVGFL HPYVYGVLVF EAMATFIGQV
301: SVLSLIALFG AATTALITTA RKGVTLLLSY LIFTKPLTEQ HGSGLLLIAM GIVLKMVPMD SKAPAKIPAR PAVRIAGGDG DREEDEERKS LV
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQM
201: EMLFCSTVVG LPFLFVPMVL TGEVFRAWTA CAQSSILSES DKEWNLLFGF ESTSIDLTRF MIQTGVGLSL EKKSKFVGFL HPYVYGVLVF EAMATFIGQV
301: SVLSLIALFG AATTALITTA RKGVTLLLSY LIFTKPLTEQ HGSGLLLIAM GIVLKMVPMD SKAPAKIPAR PAVRIAGGDG DREEDEERKS LV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.