Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G353800.1 | Wheat | plasma membrane | 97.73 | 98.29 |
| HORVU4Hr1G085820.1 | Barley | plasma membrane | 90.93 | 94.69 |
| TraesCS4D01G347700.1 | Wheat | plasma membrane | 88.1 | 89.37 |
| Os03t0118200-01 | Rice | golgi, peroxisome, plasma membrane | 85.84 | 86.82 |
| EER95630 | Sorghum | golgi, peroxisome, plasma membrane | 84.42 | 84.42 |
| Zm00001d048499_P001 | Maize | plasma membrane | 81.87 | 78.53 |
| GSMUA_Achr1P07960_001 | Banana | plasma membrane | 75.64 | 77.84 |
| Solyc08g080270.2.1 | Tomato | plasma membrane | 69.97 | 77.67 |
| VIT_15s0048g01060.t01 | Wine grape | plasma membrane | 76.49 | 77.59 |
| Bra019340.1-P | Field mustard | plasma membrane | 75.92 | 77.46 |
| VIT_02s0025g04490.t01 | Wine grape | plasma membrane | 74.79 | 75.43 |
| KRH00671 | Soybean | endoplasmic reticulum | 75.64 | 74.58 |
| KRH40518 | Soybean | plasma membrane | 75.64 | 74.58 |
| CDX94144 | Canola | plasma membrane | 75.92 | 74.44 |
| CDY70445 | Canola | cytosol, peroxisome, plasma membrane | 73.65 | 74.29 |
| CDY58606 | Canola | cytosol, peroxisome, plasma membrane | 73.65 | 74.29 |
| Bra016764.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 73.65 | 74.29 |
| AT1G12600.1 | Thale cress | plasma membrane | 73.09 | 73.93 |
| Bra013669.1-P | Field mustard | plasma membrane | 73.65 | 73.24 |
| PGSC0003DMT400058582 | Potato | plasma membrane | 72.52 | 73.14 |
| Solyc01g091840.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 68.84 | 68.26 |
| AT4G23010.3 | Thale cress | plasma membrane | 75.07 | 67.6 |
| PGSC0003DMT400000002 | Potato | plasma membrane | 52.97 | 67.51 |
| CDY41258 | Canola | plasma membrane | 73.94 | 65.25 |
| CDX98783 | Canola | plasma membrane | 68.27 | 64.27 |
| KRG88431 | Soybean | plasma membrane | 27.2 | 61.94 |
| CDY10844 | Canola | plasma membrane | 74.22 | 60.79 |
| KRH65169 | Soybean | plasma membrane | 38.81 | 44.63 |
| KRH65174 | Soybean | plasma membrane | 38.81 | 44.48 |
| TraesCS1A01G044800.1 | Wheat | plasma membrane | 20.4 | 20.57 |
| TraesCS7A01G370000.1 | Wheat | golgi, mitochondrion, plasma membrane | 18.13 | 17.78 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G521500.1 | EnsemblPlantsGene:TraesCS5A01G521500 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 | InterPro:UAA |
| PANTHER:PTHR10778 | PANTHER:PTHR10778:SF19 | PFAM:PF08449 | SUPFAM:SSF103481 | TMHMM:TMhelix | MapMan:24.2.1.1.5 |
Description
No Description!
Coordinates
chr5A:+:682709986..682712837
Molecular Weight (calculated)
39229.6 Da
IEP (calculated)
8.798
GRAVY (calculated)
0.384
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTGGNGEEQ QGRRLFGVSL TDRPVWQQFL ICSSGFFFGY LVNGICEEYV YNRLQFSYGW YFTFVQGFVY LGLIRLQGFT VKHMVNPWRT YVRLSAVLMG
101: SNGLTKGSLA FLNYPAQIMF KSTKVLPVMI MGAFIPGLRR KYPFHEYVSA VMLVIGLILF TLADAQTSPN FSMIGVAMVS SALIMDAFLG NLQEAIFKMN
201: PDTTQMEMLF CSTVVGLPFL AVPMVLTGEL TTAWSACSQH LYVYAVLVFE AMATFVGQVS VLSLIALFGA ATTAMVTTAR KAVTLLLSYL IFTKPMTEQH
301: VTGLLLITMG IVLRLLPEDK EKKGMAERQQ AKAQRGEEKR RGDGVEEETS PLV
101: SNGLTKGSLA FLNYPAQIMF KSTKVLPVMI MGAFIPGLRR KYPFHEYVSA VMLVIGLILF TLADAQTSPN FSMIGVAMVS SALIMDAFLG NLQEAIFKMN
201: PDTTQMEMLF CSTVVGLPFL AVPMVLTGEL TTAWSACSQH LYVYAVLVFE AMATFVGQVS VLSLIALFGA ATTAMVTTAR KAVTLLLSYL IFTKPMTEQH
301: VTGLLLITMG IVLRLLPEDK EKKGMAERQQ AKAQRGEEKR RGDGVEEETS PLV
001: MKEEQTRSLF GISLSDKPTW QQFLICTSGF FFGYLVNGVC EEYVYNRLQF SFGWYFTFIQ GFVYLFLIYL QGFTTKHIVN PMRTYVKLSA VLMGSHGLTK
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQM
201: EMLFCSTVVG LPFLFVPMVL TGEVFRAWTA CAQHPYVYGV LVFEAMATFI GQVSVLSLIA LFGAATTALI TTARKGVTLL LSYLIFTKPL TEQHGSGLLL
301: IAMGIVLKMV PMDSKAPAKI PARPAVRIAG GDGDREEDEE RKSLV
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQM
201: EMLFCSTVVG LPFLFVPMVL TGEVFRAWTA CAQHPYVYGV LVFEAMATFI GQVSVLSLIA LFGAATTALI TTARKGVTLL LSYLIFTKPL TEQHGSGLLL
301: IAMGIVLKMV PMDSKAPAKI PARPAVRIAG GDGDREEDEE RKSLV
Arabidopsis Description
UTR2UDP-galactose transporter 2 [Source:TAIR;Acc:AT4G23010]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.