Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016764.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 86.53 | 86.29 |
| CDY58606 | Canola | cytosol, peroxisome, plasma membrane | 86.53 | 86.29 |
| CDY70445 | Canola | cytosol, peroxisome, plasma membrane | 86.53 | 86.29 |
| Solyc08g080270.2.1 | Tomato | plasma membrane | 72.21 | 79.25 |
| VIT_02s0025g04490.t01 | Wine grape | plasma membrane | 79.37 | 79.14 |
| VIT_15s0048g01060.t01 | Wine grape | plasma membrane | 77.94 | 78.16 |
| KRH40518 | Soybean | plasma membrane | 79.37 | 77.37 |
| KRH00671 | Soybean | endoplasmic reticulum | 79.37 | 77.37 |
| Os03t0118200-01 | Rice | golgi, peroxisome, plasma membrane | 76.22 | 76.22 |
| HORVU4Hr1G085820.1 | Barley | plasma membrane | 73.35 | 75.52 |
| GSMUA_Achr1P07960_001 | Banana | plasma membrane | 74.21 | 75.51 |
| EER95630 | Sorghum | golgi, peroxisome, plasma membrane | 75.36 | 74.5 |
| TraesCS4B01G353800.1 | Wheat | plasma membrane | 74.21 | 73.79 |
| PGSC0003DMT400058582 | Potato | plasma membrane | 73.93 | 73.71 |
| TraesCS4D01G347700.1 | Wheat | plasma membrane | 73.35 | 73.56 |
| TraesCS5A01G521500.1 | Wheat | plasma membrane | 73.93 | 73.09 |
| Solyc01g091840.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 73.93 | 72.47 |
| PGSC0003DMT400000002 | Potato | plasma membrane | 57.31 | 72.2 |
| AT4G23010.3 | Thale cress | plasma membrane | 77.94 | 69.39 |
| Zm00001d048499_P001 | Maize | plasma membrane | 72.78 | 69.02 |
| KRG88431 | Soybean | plasma membrane | 29.8 | 67.1 |
| KRH65174 | Soybean | plasma membrane | 42.41 | 48.05 |
| KRH65169 | Soybean | plasma membrane | 41.55 | 47.23 |
| AT5G59740.1 | Thale cress | plasma membrane | 21.49 | 21.8 |
| AT1G14360.1 | Thale cress | plasma membrane | 20.63 | 21.75 |
| AT2G02810.1 | Thale cress | plasma membrane | 20.63 | 21.69 |
| AT3G46180.1 | Thale cress | peroxisome, plasma membrane, vacuole | 20.92 | 21.04 |
Protein Annotations
| MapMan:24.2.1.1.5 | EntrezGene:837816 | ProteinID:AAF79647.1 | ProteinID:AAF88097.1 | ProteinID:AEE28900.1 | ArrayExpress:AT1G12600 |
| EnsemblPlantsGene:AT1G12600 | RefSeq:AT1G12600 | TAIR:AT1G12600 | RefSeq:AT1G12600-TAIR-G | EnsemblPlants:AT1G12600.1 | TAIR:AT1G12600.1 |
| EMBL:AY800577 | EMBL:AY924666 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0008643 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030173 | GO:GO:0030176 |
| GO:GO:0046964 | GO:GO:0055085 | GO:GO:1902559 | RefSeq:NP_172720.1 | PFAM:PF08449 | PO:PO:0001016 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR10778 | PANTHER:PTHR10778:SF29 | UniProt:Q9LDX3 | SUPFAM:SSF103481 | TMHMM:TMhelix |
| InterPro:UAA | UniParc:UPI00000A20D9 | : | : | : | : |
Description
UTR4UDP-galactose/UDP-glucose transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDX3]
Coordinates
chr1:-:4286204..4289069
Molecular Weight (calculated)
38946.5 Da
IEP (calculated)
8.758
GRAVY (calculated)
0.409
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTNSEEQMI KLFGIPLSDK PRWQQFLICS SGFFFGYLVN GICEEYVYNR LKFSYGWYFT FAQGLVYIAL IYMYGFRTKQ MVNPWKTYVK LSGVLMGSHG
101: LTKGSLAYLN YPAQIMFKST KVLPVMVMGA FIPGLRRKYP VHEYISAMLL VIGLILFTLA DAHTSPNFSI IGVMMISGAL IMDAFLGNLQ EAIFTMNPET
201: TQMEMLFCST VVGLPFLLAP MILTGELFTA WNSCAQHPYV YGVLVFEAMA TFIGQVSVLS LIALFGAATT AMITTARKAV TLLLSYLIFT KPLTEQHGTG
301: LLLIFMGIIL KMVPDPNPNP KSSGSGQTPG KLERVKFEKE DDEESRPLV
101: LTKGSLAYLN YPAQIMFKST KVLPVMVMGA FIPGLRRKYP VHEYISAMLL VIGLILFTLA DAHTSPNFSI IGVMMISGAL IMDAFLGNLQ EAIFTMNPET
201: TQMEMLFCST VVGLPFLLAP MILTGELFTA WNSCAQHPYV YGVLVFEAMA TFIGQVSVLS LIALFGAATT AMITTARKAV TLLLSYLIFT KPLTEQHGTG
301: LLLIFMGIIL KMVPDPNPNP KSSGSGQTPG KLERVKFEKE DDEESRPLV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.