Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70445 | Canola | cytosol, peroxisome, plasma membrane | 92.0 | 92.0 |
| AT1G12600.1 | Thale cress | plasma membrane | 86.29 | 86.53 |
| VIT_15s0048g01060.t01 | Wine grape | plasma membrane | 79.14 | 79.6 |
| Solyc08g080270.2.1 | Tomato | plasma membrane | 72.29 | 79.56 |
| VIT_02s0025g04490.t01 | Wine grape | plasma membrane | 79.43 | 79.43 |
| KRH00671 | Soybean | endoplasmic reticulum | 80.29 | 78.49 |
| KRH40518 | Soybean | plasma membrane | 80.0 | 78.21 |
| Os03t0118200-01 | Rice | golgi, peroxisome, plasma membrane | 77.43 | 77.65 |
| EER95630 | Sorghum | golgi, peroxisome, plasma membrane | 76.57 | 75.92 |
| CDX94144 | Canola | plasma membrane | 78.0 | 75.83 |
| PGSC0003DMT400058582 | Potato | plasma membrane | 75.43 | 75.43 |
| HORVU4Hr1G085820.1 | Barley | plasma membrane | 72.86 | 75.22 |
| GSMUA_Achr1P07960_001 | Banana | plasma membrane | 73.71 | 75.22 |
| TraesCS4B01G353800.1 | Wheat | plasma membrane | 74.29 | 74.07 |
| Solyc01g091840.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 75.14 | 73.88 |
| TraesCS4D01G347700.1 | Wheat | plasma membrane | 73.43 | 73.85 |
| TraesCS5A01G521500.1 | Wheat | plasma membrane | 74.29 | 73.65 |
| PGSC0003DMT400000002 | Potato | plasma membrane | 57.71 | 72.92 |
| Zm00001d048499_P001 | Maize | plasma membrane | 74.0 | 70.38 |
| CDY41258 | Canola | plasma membrane | 76.57 | 67.0 |
| CDX98783 | Canola | plasma membrane | 71.14 | 66.4 |
| KRG88431 | Soybean | plasma membrane | 29.14 | 65.81 |
| CDY10844 | Canola | plasma membrane | 76.0 | 61.72 |
| KRH65174 | Soybean | plasma membrane | 42.0 | 47.73 |
| KRH65169 | Soybean | plasma membrane | 41.71 | 47.56 |
| CDY41674 | Canola | plasma membrane | 21.43 | 22.59 |
| CDY66447 | Canola | peroxisome | 18.86 | 22.07 |
| CDY49089 | Canola | plasma membrane | 20.57 | 21.75 |
| CDY60561 | Canola | cytosol, peroxisome, plasma membrane | 21.14 | 21.57 |
| CDY39320 | Canola | plasma membrane | 20.29 | 21.45 |
| CDY33752 | Canola | plasma membrane | 20.29 | 21.45 |
| CDX80234 | Canola | plasma membrane | 20.57 | 20.99 |
| CDY49577 | Canola | plasma membrane | 20.29 | 20.7 |
| CDY09353 | Canola | plasma membrane | 21.43 | 20.55 |
| CDX88721 | Canola | cytosol, peroxisome, plasma membrane | 21.14 | 19.27 |
| CDX94506 | Canola | extracellular | 5.14 | 18.75 |
| CDX71077 | Canola | cytosol | 21.14 | 17.21 |
Protein Annotations
| EnsemblPlants:CDY58606 | EnsemblPlantsGene:GSBRNA2T00024889001 | GO:A0A078J3Y1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:UAA | PANTHER:PTHR10778 | PANTHER:PTHR10778:SF29 |
| PFAM:PF08449 | ProteinID:CDY58606 | ProteinID:CDY58606.1 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EE173C |
| UniProt:A0A078J3Y1 | MapMan:24.2.1.1.5 | : | : | : | : |
Description
BnaCnng33350DBnaCnng33350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3Y1]
Coordinates
chrLK033683:+:6695..9254
Molecular Weight (calculated)
39074.6 Da
IEP (calculated)
9.321
GRAVY (calculated)
0.387
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNSEEQMRS LFGISLSDKP RWQQFLICSS GFFFGYLVNG VCEEYVYNRL KFSYGWYFTF VQGLVYIVMI YLNGFNTKQM VNPWKTYVKL SAVLMGSHGL
101: TKGSLAYLNY PAQIMFKSTK VLPVMVMGAF IPGLRRRYPV HEYISAMLLV IGLILFTLAD AHTSPNFSII GVMMISGALV MDAFLGNLQE AIFTLNPDTT
201: QMEMLFCSTV VGLPFLIAPM ILTGELFRAW TSCAQHPYVY GVLVFEAMAT FVGQVSVLSL IALFGAATTA MITTARKAVT LLLSYLIFTK PLTEQHGTGL
301: LLISMGIILK MVPDPNPNRN PKLSNSGQKT RKLELVKSEK EGDEESRPLV
101: TKGSLAYLNY PAQIMFKSTK VLPVMVMGAF IPGLRRRYPV HEYISAMLLV IGLILFTLAD AHTSPNFSII GVMMISGALV MDAFLGNLQE AIFTLNPDTT
201: QMEMLFCSTV VGLPFLIAPM ILTGELFRAW TSCAQHPYVY GVLVFEAMAT FVGQVSVLSL IALFGAATTA MITTARKAVT LLLSYLIFTK PLTEQHGTGL
301: LLISMGIILK MVPDPNPNRN PKLSNSGQKT RKLELVKSEK EGDEESRPLV
001: MKTNSEEQMI KLFGIPLSDK PRWQQFLICS SGFFFGYLVN GICEEYVYNR LKFSYGWYFT FAQGLVYIAL IYMYGFRTKQ MVNPWKTYVK LSGVLMGSHG
101: LTKGSLAYLN YPAQIMFKST KVLPVMVMGA FIPGLRRKYP VHEYISAMLL VIGLILFTLA DAHTSPNFSI IGVMMISGAL IMDAFLGNLQ EAIFTMNPET
201: TQMEMLFCST VVGLPFLLAP MILTGELFTA WNSCAQHPYV YGVLVFEAMA TFIGQVSVLS LIALFGAATT AMITTARKAV TLLLSYLIFT KPLTEQHGTG
301: LLLIFMGIIL KMVPDPNPNP KSSGSGQTPG KLERVKFEKE DDEESRPLV
101: LTKGSLAYLN YPAQIMFKST KVLPVMVMGA FIPGLRRKYP VHEYISAMLL VIGLILFTLA DAHTSPNFSI IGVMMISGAL IMDAFLGNLQ EAIFTMNPET
201: TQMEMLFCST VVGLPFLLAP MILTGELFTA WNSCAQHPYV YGVLVFEAMA TFIGQVSVLS LIALFGAATT AMITTARKAV TLLLSYLIFT KPLTEQHGTG
301: LLLIFMGIIL KMVPDPNPNP KSSGSGQTPG KLERVKFEKE DDEESRPLV
Arabidopsis Description
UTR4UDP-galactose/UDP-glucose transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDX3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.