CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006695.1-P	Field mustard	cytosol, peroxisome, plasma membrane	71.4	95.34
CDY60561	Canola	cytosol, peroxisome, plasma membrane	74.19	93.0
CDX80234	Canola	plasma membrane	71.4	89.5
CDY66447	Canola	peroxisome	62.09	89.3
AT5G59740.1	Thale cress	plasma membrane	70.93	88.66
CDY49577	Canola	plasma membrane	69.77	87.46
CDX88721	Canola	cytosol, peroxisome, plasma membrane	77.44	86.72
PGSC0003DMT400040212	Potato	plasma membrane	59.53	77.11
VIT_06s0004g04070.t01	Wine grape	peroxisome, plasma membrane, vacuole	61.63	77.03
PGSC0003DMT400028218	Potato	peroxisome, plasma membrane, vacuole	42.33	75.83
Solyc06g005290.2.1	Tomato	peroxisome	59.77	74.28
Solyc11g073190.1.1	Tomato	peroxisome, plasma membrane, vacuole	52.09	74.17
GSMUA_Achr6P33190_001	Banana	extracellular	23.02	69.23
TraesCS1A01G044800.1	Wheat	plasma membrane	54.65	67.14
Zm00001d035601_P001	Maize	plasma membrane	54.42	67.05
TraesCS1D01G045400.1	Wheat	plasma membrane	54.42	66.86
HORVU1Hr1G008350.2	Barley	plasma membrane	54.19	66.57
TraesCS1B01G058000.1	Wheat	plasma membrane	53.72	66.0
Os05t0115700-01	Rice	endoplasmic reticulum, plastid, vacuole	54.42	65.0
EES17597	Sorghum	peroxisome, plasma membrane, vacuole	54.19	64.9
Zm00001d011038_P002	Maize	plasma membrane	53.95	64.62
CDY41674	Canola	plasma membrane	22.56	29.22
CDY49089	Canola	plasma membrane	22.09	28.7
CDY33752	Canola	plasma membrane	21.86	28.4
CDY39320	Canola	plasma membrane	21.86	28.4
CDY09353	Canola	plasma membrane	22.56	26.58
CDX94506	Canola	extracellular	5.81	26.04
CDY58606	Canola	cytosol, peroxisome, plasma membrane	17.21	21.14
CDY70445	Canola	cytosol, peroxisome, plasma membrane	16.98	20.86
CDX94144	Canola	plasma membrane	16.98	20.28
CDY41258	Canola	plasma membrane	17.21	18.5
CDX98783	Canola	plasma membrane	16.05	18.4
CDY10844	Canola	plasma membrane	17.21	17.17

Protein Annotations

EnsemblPlants:CDX71077	EnsemblPlantsGene:GSBRNA2T00141028001	GO:A0A078C2T6	GO:GO:0006810	GO:GO:0008150	GO:GO:0055085
InterPro:UAA	PANTHER:PTHR10778	PANTHER:PTHR10778:SF13	PFAM:PF08449	ProteinID:CDX71077	ProteinID:CDX71077.1
SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EE84D8	MapMan:24.2.1.1.5	:

Description

BnaC03g11610D

Coordinates

chrLK031791:+:3561432..3565034

Molecular Weight (calculated)

47890.5 Da

IEP (calculated)

9.363

GRAVY (calculated)

0.124

Length

430 amino acids

Sequence
(BLAST)

001: MVTLTQSSNQ SRFGIKDTIK PNIQLYNPRE HNFRRSKKVL KERRGEDGGA ESDRVGESPE ISICSSQIGR CIVSVRRLVR DGGWAMAEPE TVNGVKESKL
101: WKGVFAVSGI MSTLVIYGVL QEKIMRVPYG LNKEFFKYSL FLVFCNRLTT SAVSAGALLA SKKALDPVAP VYKYCLISVT NILTTTCQYE ALKYVSFPVQ
201: TLAKCAKMIP VMVWGTLIMQ KKYKGFDYLV AFLVTLGCSV FILFPAGDDI SPYNKGRENT VWGVSLMAGY LGFDGFTSTF QDKLFKGYNM EIHNQIFYTT
301: LCSCVLSFTG LVLQGHLLLA VDFVSRHRDC LLDIALLSTV ATASQFFISY TIRTFGALTF AAIMTTRQLA SIMLSCIWFS HPLSWEQCIG SVIVFGSLYA
401: KNLLNNNKKS QTQPPPPPEL PQYGKPESSS

Best Arabidopsis Sequence Match ( AT5G59740.1 )
(BLAST)

001: MAEPELVNGG VKENKLWKGV FAVSGIMSTL VIYGVLQEKI MRVPYGVNKE FFKHSLFLVF CNRLTTSAVS AGALLASKKV LDPVAPVYKY CLISVTNILT
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYLVAFLV TLGCSVFILF PAGDDVSPYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLPAVDFV SLHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKNSQTQP PPPELPQYEK VESS

Arabidopsis Description

UTR5BUDP-galactose/UDP-glucose transporter 5B [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.