CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
plasma membrane 2
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66447	Canola	peroxisome	80.76	92.64
CDX80234	Canola	plasma membrane	92.13	92.13
CDY49577	Canola	plasma membrane	89.5	89.5
AT5G59740.1	Thale cress	plasma membrane	88.92	88.66
CDX88721	Canola	cytosol, peroxisome, plasma membrane	93.59	83.59
VIT_06s0004g04070.t01	Wine grape	peroxisome, plasma membrane, vacuole	77.26	77.03
PGSC0003DMT400040212	Potato	plasma membrane	74.05	76.51
PGSC0003DMT400028218	Potato	peroxisome, plasma membrane, vacuole	53.06	75.83
CDX71077	Canola	cytosol	93.0	74.19
Solyc11g073190.1.1	Tomato	peroxisome, plasma membrane, vacuole	65.31	74.17
Solyc06g005290.2.1	Tomato	peroxisome	74.64	73.99
GSMUA_Achr6P33190_001	Banana	extracellular	28.28	67.83
TraesCS1A01G044800.1	Wheat	plasma membrane	69.1	67.71
TraesCS1D01G045400.1	Wheat	plasma membrane	68.8	67.43
HORVU1Hr1G008350.2	Barley	plasma membrane	68.8	67.43
Zm00001d035601_P001	Maize	plasma membrane	68.51	67.34
TraesCS1B01G058000.1	Wheat	plasma membrane	67.93	66.57
EES17597	Sorghum	peroxisome, plasma membrane, vacuole	68.51	65.46
Os05t0115700-01	Rice	endoplasmic reticulum, plastid, vacuole	68.51	65.28
Zm00001d011038_P002	Maize	plasma membrane	67.93	64.9
CDY41674	Canola	plasma membrane	28.28	29.22
CDY49089	Canola	plasma membrane	27.41	28.4
CDY39320	Canola	plasma membrane	27.41	28.4
CDY33752	Canola	plasma membrane	27.41	28.4
CDY09353	Canola	plasma membrane	28.28	26.58
CDX94506	Canola	extracellular	7.29	26.04
CDY58606	Canola	cytosol, peroxisome, plasma membrane	21.57	21.14
CDY70445	Canola	cytosol, peroxisome, plasma membrane	21.28	20.86
CDX94144	Canola	plasma membrane	20.99	20.0
CDX98783	Canola	plasma membrane	19.83	18.13
CDY41258	Canola	plasma membrane	20.99	18.0
CDY10844	Canola	plasma membrane	20.99	16.71

Protein Annotations

MapMan:24.2.1.1.5	GO:A0A078J9C8	UniProt:A0A078J9C8	EnsemblPlants:CDY60561	ProteinID:CDY60561	ProteinID:CDY60561.1
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00029760001	PFAM:PF08449	PANTHER:PTHR10778	PANTHER:PTHR10778:SF13	SUPFAM:SSF103481	TMHMM:TMhelix
InterPro:UAA	UniParc:UPI0004EEE2D3	SEG:seg	:	:	:

Description

BnaA02g06870DBnaA02g06870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9C8]

Coordinates

chrLK033893:+:4052..6133

Molecular Weight (calculated)

38244.1 Da

IEP (calculated)

8.770

GRAVY (calculated)

0.348

Length

343 amino acids

Sequence
(BLAST)

001: MAEPEAVNGV KENKLWKGVF AVSGIMSTLV IYGVLQEKIM RVPYGLNKEF FKYSLFLVFC NRLTTSAVSA GALLASKKVL DPVAPVYKYC LISVTNILTT
101: TCQYEALKYV SFPVQTLAKC AKMIPVMVWG TLIMQKKYKG FDYLVAFLVT LGCSVFILFP AGDDVSPYNK GRENTVWGVS LMAGYLGFDG FTSTFQDKLF
201: KGYNMEIHNQ IFYTTLCSCV LSFTGLILQG HLLLAVDFVS RHRDCLVDIA LLSTVATASQ FFISYTIRTF GALTFAAIMT TRQLASIMLS CIWFSHPLSW
301: EQCIGSVIVF GSLYAKNLLN NNKRTEKQPP PPELPQYEKP EGS

Best Arabidopsis Sequence Match ( AT5G59740.1 )
(BLAST)

001: MAEPELVNGG VKENKLWKGV FAVSGIMSTL VIYGVLQEKI MRVPYGVNKE FFKHSLFLVF CNRLTTSAVS AGALLASKKV LDPVAPVYKY CLISVTNILT
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYLVAFLV TLGCSVFILF PAGDDVSPYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLPAVDFV SLHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKNSQTQP PPPELPQYEK VESS

Arabidopsis Description

UTR5BUDP-galactose/UDP-glucose transporter 5B [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.