Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G02810.1 | CDX70995 | AT5G22290.1 | 21798944 |
| AT2G02810.1 | CDX88803 | AT5G22290.1 | 21798944 |
| AT2G02810.1 | CDX92368 | AT5G22290.1 | 21798944 |
| AT2G02810.1 | CDY09128 | AT5G22290.1 | 21798944 |
| AT2G02810.1 | CDY35676 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G02810.1 | Thale cress | plasma membrane | 92.17 | 92.17 |
| CDY09353 | Canola | plasma membrane | 100.0 | 90.96 |
| CDY33752 | Canola | plasma membrane | 88.25 | 88.52 |
| CDY49089 | Canola | plasma membrane | 87.65 | 87.92 |
| CDY39320 | Canola | plasma membrane | 87.35 | 87.61 |
| KRH74812 | Soybean | plasma membrane | 82.83 | 83.33 |
| KRH69315 | Soybean | plasma membrane | 82.53 | 83.03 |
| PGSC0003DMT400002255 | Potato | plastid | 58.73 | 82.63 |
| Bra026579.1-P | Field mustard | peroxisome | 89.16 | 81.77 |
| Solyc01g010650.2.1 | Tomato | plasma membrane | 81.63 | 81.38 |
| PGSC0003DMT400065812 | Potato | plasma membrane | 81.33 | 81.33 |
| VIT_01s0026g01890.t01 | Wine grape | extracellular | 81.02 | 81.02 |
| Solyc05g007150.2.1 | Tomato | plasma membrane | 80.72 | 76.79 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 79.82 | 75.07 |
| CDX94506 | Canola | extracellular | 20.78 | 71.88 |
| Os06t0593100-01 | Rice | golgi, peroxisome, plasma membrane | 74.4 | 68.99 |
| Zm00001d046467_P001 | Maize | golgi, peroxisome, plasma membrane | 75.0 | 68.98 |
| EER88586 | Sorghum | mitochondrion | 74.1 | 67.96 |
| HORVU7Hr1G085180.1 | Barley | golgi, mitochondrion, plastid | 72.89 | 67.79 |
| TraesCS7D01G353100.1 | Wheat | golgi, mitochondrion, plasma membrane | 72.89 | 67.6 |
| TraesCS7B01G258500.1 | Wheat | golgi, mitochondrion, plastid | 72.59 | 67.51 |
| TraesCS7A01G370000.1 | Wheat | golgi, mitochondrion, plasma membrane | 72.29 | 66.67 |
| KRG99133 | Soybean | extracellular | 23.8 | 62.2 |
| Zm00001d036940_P003 | Maize | cytosol, mitochondrion, plasma membrane | 69.58 | 61.6 |
| GSMUA_Achr10P... | Banana | extracellular | 25.0 | 59.71 |
| Zm00001d036936_P002 | Maize | endoplasmic reticulum, mitochondrion, peroxisome | 57.23 | 55.88 |
| CDX80234 | Canola | plasma membrane | 29.52 | 28.57 |
| CDY66447 | Canola | peroxisome | 25.6 | 28.43 |
| CDY60561 | Canola | cytosol, peroxisome, plasma membrane | 29.22 | 28.28 |
| CDY49577 | Canola | plasma membrane | 28.92 | 27.99 |
| CDX88721 | Canola | cytosol, peroxisome, plasma membrane | 29.22 | 25.26 |
| CDX71077 | Canola | cytosol | 29.22 | 22.56 |
| CDY70445 | Canola | cytosol, peroxisome, plasma membrane | 22.59 | 21.43 |
| CDY58606 | Canola | cytosol, peroxisome, plasma membrane | 22.59 | 21.43 |
| CDX94144 | Canola | plasma membrane | 22.29 | 20.56 |
| PGSC0003DMT400000700 | Potato | endoplasmic reticulum | 4.82 | 20.51 |
| CDX98783 | Canola | plasma membrane | 21.39 | 18.93 |
| CDY41258 | Canola | plasma membrane | 21.99 | 18.25 |
| CDY10844 | Canola | plasma membrane | 21.39 | 16.47 |
Protein Annotations
| EnsemblPlants:CDY41674 | EnsemblPlantsGene:GSBRNA2T00073353001 | GO:A0A078HW95 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:UAA | PANTHER:PTHR10778 | PANTHER:PTHR10778:SF10 |
| PFAM:PF08449 | ProteinID:CDY41674 | ProteinID:CDY41674.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE42C6 |
| UniProt:A0A078HW95 | MapMan:24.2.1.1.5 | : | : | : | : |
Description
BnaC02g34800DBnaC02g34800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HW95]
Coordinates
chrLK032503:-:54632..56455
Molecular Weight (calculated)
36911.3 Da
IEP (calculated)
9.676
GRAVY (calculated)
0.270
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANGSGFRR ILLLALCVSG IWSAYIYQGV LQETLSTKRF GPDEKRFEHL AFLNLAQSVV CLVWSFIMIK LWSNTGNGGA PWWTYWSAGI TNTIGPAMGI
101: EALKYISYPA QVLAKSSKMI PVMLMGTLVY GIRYTFPEYI CTFLVAGGVA VFALLKTSSK TISKLAHPNA PLGYALCFLN LAFDGFTNAT QDSIASRYPK
201: TEAWDIMLGM NLWGTIYNMV YMFGLPQGMG FEAYQFCKQH PEAAWDILKY CLCGAVGQNF IFMTISNFGS LANTTITTTR KFVSIVVSSV MSGNPLSLKQ
301: WGCVSMVFGG LSYQIFLKWS KSKRVEKKKQ KS
101: EALKYISYPA QVLAKSSKMI PVMLMGTLVY GIRYTFPEYI CTFLVAGGVA VFALLKTSSK TISKLAHPNA PLGYALCFLN LAFDGFTNAT QDSIASRYPK
201: TEAWDIMLGM NLWGTIYNMV YMFGLPQGMG FEAYQFCKQH PEAAWDILKY CLCGAVGQNF IFMTISNFGS LANTTITTTR KFVSIVVSSV MSGNPLSLKQ
301: WGCVSMVFGG LSYQIFLKWS KSKRVEKKKQ KS
001: MEVHGSGFRR ILLLALCISG IWSAYIYQGV LQETLSTKRF GPDEKRFEHL AFLNLAQSVV CLIWSYIMIK LWSNAGNGGA PWWTYWSAGI TNTIGPAMGI
101: EALKYISYPA QVLAKSSKMI PVMLMGTLVY GIRYTFPEYM CTFLVAGGVS IFALLKTSSK TISKLAHPNA PLGYALCSLN LAFDGFTNAT QDSIASRYPK
201: TEAWDIMLGM NLWGTIYNMI YMFGLPQGIG FKAIQFCKLH PEAAWDILKY CICGAVGQNF IFMTISNFGS LANTTITTTR KFVSIVVSSV MSGNPLSLKQ
301: WGCVSMVFGG LAYQIYLKWK KLQRVEKKKQ KS
101: EALKYISYPA QVLAKSSKMI PVMLMGTLVY GIRYTFPEYM CTFLVAGGVS IFALLKTSSK TISKLAHPNA PLGYALCSLN LAFDGFTNAT QDSIASRYPK
201: TEAWDIMLGM NLWGTIYNMI YMFGLPQGIG FKAIQFCKLH PEAAWDILKY CICGAVGQNF IFMTISNFGS LANTTITTTR KFVSIVVSSV MSGNPLSLKQ
301: WGCVSMVFGG LAYQIYLKWK KLQRVEKKKQ KS
Arabidopsis Description
UTR1UDP-galactose/UDP-glucose transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:O64503]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.